Gene Bfae_15020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_15020 
Symbol 
ID8400049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp1692266 
End bp1692880 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content76% 
IMG OID644997569 
Productshikimate kinase 
Protein accessionYP_003154922 
Protein GI257068667 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0201152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGCC CCCTCGCCAT CCTCATCGGC CCGATGGCGG CGGGCAAGAC CAGCGTGGGG 
CGCGCCCTCG CCTCCCGGCT CGAGGTCCCC TTCGCGGATC TCGACGCCCT GATCGTCGAG 
GCCGACGGGC GGAGCATCCC GGAGATCTTC GCCGCCGACG GGGAGAACAC CTTCCGCGAG 
CTCGAGGCGG CCACGCTCGC CCGGGCGCTG CTCGAGCACC CCGGGATCCT CTCCCTCGGC 
GGCGGCGCTC CCATGCATCC CGCCTCGGCG GAGCGGCTGC GCGGCGGTCC CGTGATCTGG 
CTCGACGTCG ACGAAGCGAT CGCCGCGCGC CGCCTCGCCC ACGGCAGCGG CCGACCGCTG 
CTGCAGGGTG AGGACCCGAT GGGGCGCTGG CGCGAGCTGG CGCGCGAGCG CAGCCCGCGC 
TACCGCGAGC TGGCGGCGCT GCGGATCGAT GCCGGGCACG GCAGCCCCGC GCGCGTGGCA 
CGCGCGATCC TCGGCACGCT GCAGCTCGAG CCGCGCACGC GCCCCGACCA GGCAGCGCAT 
GCCCACCAGC GGACGCAGTC CGCCCGACCG GCGCAGCCCA CGCCGCTGAA CCGTCCCGAG 
AAGGAGACCT CATGA
 
Protein sequence
MTGPLAILIG PMAAGKTSVG RALASRLEVP FADLDALIVE ADGRSIPEIF AADGENTFRE 
LEAATLARAL LEHPGILSLG GGAPMHPASA ERLRGGPVIW LDVDEAIAAR RLAHGSGRPL 
LQGEDPMGRW RELARERSPR YRELAALRID AGHGSPARVA RAILGTLQLE PRTRPDQAAH 
AHQRTQSARP AQPTPLNRPE KETS