Gene Bfae_14990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_14990 
SymbolrpsA 
ID8400046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1688401 
End bp1689882 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content67% 
IMG OID644997566 
Product30S ribosomal protein S1 
Protein accessionYP_003154919 
Protein GI257068664 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0409109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA CCACGACCCC CCAGATCGCC ATCAATGACA TCGGCGGCGC CGACGAGCTC 
ATGGCTGCCA TCGATGCCAC CATCAAGTAC TTCAACGATG GCGACATCGT CGAGGGCACC
GTGGTGAAGG TCGATCACGA CGAGGTCCTC CTGGACATCG GCTACAAGAC CGAGGGCGTC
ATCCCCTCGC GCGAGCTGTC CATCAAGCAC GACGTCGACC CCGGCGAGAT CGTCGAGGTC
GGTGACGAGA TCGAGGCCCT GGTCCTCCAG AAGGAGGACA AGGAAGGCCG TCTGATCCTG
TCCAAGAAGC GCGCCCAGTA CGAGCGCGCC TGGGGCACGA TCGAGCAGAT CAAGGAAGAC
GAGGGCGTCG TCACCGGCCG CGTCATCGAG GTCGTCAAGG GCGGCCTCAT CGTCGACATC
GGCCTGCGCG GCTTCCTCCC CGCCTCCCTC GTCGAGATGC GTCGCGTCCG CGACCTGCAG
CCCTACGTCG GCCAGGAGAT CGAGGCGAAG ATCATCGAGC TCGACAAGAA CCGCAACAAC
GTGGTCCTGT CGCGCCGTGC GTACCTCGAG GAGACCCAGT CCGCGGTCCG CTCGGACTTC
CTGCAGACCC TGCAGAAGGG CCAGGTCCGC GAGGGCGCCG TGTCCTCCAT CGTCAACTTC
GGCGCGTTCG TCGATCTCGG CGGTGTCGAC GGCCTGGTGC ACGTCTCCGA GCTGTCCTGG
AAGCACATCG ACCACCCCTC CGAGGTCGTC GAGGTCGGTC AGAAGGTCTC CGTCGAGGTC
CTGGACGTCG ACATGGACCG CGAGCGCGTC TCCCTGTCGC TGAAGGCGAC CCAGGAGGAC
CCGTGGCAGC TCTTCGCCCG CACCCACGCC ATCGGTGAGG TCGTCCCGGG CAAGGTCACC
AAGCTGGTCC CCTTCGGTGC GTTCGTGCGC GTCGAGGACG GCATCGAGGG CCTGGTGCAC
ATCTCCGAGC TGGCCCAGCG CCACGTGGAT CTGCCCGAGC AGGTCGTCAC CGTCGACCAG
GACGTCTTCG TCAAGGTCAT CGACATCGAC CTCGAGCGTC GCCGGATCTC GCTCTCGCTC
AAGCAGGCGA ACGAGGGCGT CGACCCCGAG GGCGACGACA CCACCTTCGA TCCCGCGCTC
TACGGCATGG CCGCGGAGTA CGACGCCAAC GGCGAGTACA AGTACCCCGA GGGCTTCGAC
CCGGAGACCA ACGAGTGGCT CGAGGGCTAC GACGCCCAGC GCGAGGAGTG GGAGGCCCAG
TACGCGGCCG CTTACGAGCG CTGGACCGCG CACAAGGCGC AGGTCGCCGA GGCCATCAAG
GCCGACGAGG AGTCCGCGAA CGCCCCGGCC GCCGCGGCGT CCACCAGCTC CGACGCGGGT
GCCTCCGCTC AGGCGTCCTA CCAGTCGAGC TCCTCGGACG AGGGCACCCT GGCCTCCGAT
GAGGCCCTGG CCGCCCTGCG CGCCAAGCTC ACCGGCAACT GA
 
Protein sequence
MTDTTTPQIA INDIGGADEL MAAIDATIKY FNDGDIVEGT VVKVDHDEVL LDIGYKTEGV 
IPSRELSIKH DVDPGEIVEV GDEIEALVLQ KEDKEGRLIL SKKRAQYERA WGTIEQIKED
EGVVTGRVIE VVKGGLIVDI GLRGFLPASL VEMRRVRDLQ PYVGQEIEAK IIELDKNRNN
VVLSRRAYLE ETQSAVRSDF LQTLQKGQVR EGAVSSIVNF GAFVDLGGVD GLVHVSELSW
KHIDHPSEVV EVGQKVSVEV LDVDMDRERV SLSLKATQED PWQLFARTHA IGEVVPGKVT
KLVPFGAFVR VEDGIEGLVH ISELAQRHVD LPEQVVTVDQ DVFVKVIDID LERRRISLSL
KQANEGVDPE GDDTTFDPAL YGMAAEYDAN GEYKYPEGFD PETNEWLEGY DAQREEWEAQ
YAAAYERWTA HKAQVAEAIK ADEESANAPA AAASTSSDAG ASAQASYQSS SSDEGTLASD
EALAALRAKL TGN