| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_14550 |
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| Symbol | |
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| ID | 8400002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | + |
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| Start bp | 1642562 |
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| End bp | 1644499 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644997522 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003154876 |
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| Protein GI | 257068621 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.825598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGACGA CTCAGGCGCA CATCGTGCAC ACCGCGGGAG ACGTCCCCGA CGAGGTCGGG
ATCCCCGCTG ATCCGGCGGC TCTGCGCGCG CTTCCCGCGA CGGACCTCCC GGGCCTCGCC
CGCACCCTGC GGCGCCGCCT GGTCGAGATC ACCTCGCGCA CCGGTGGGCA CCTGGGCCCC
AACCTCGGGG TCGTGGAGCT GACGATCGCG CTGCACCGCG AGTTCGACTC GCCCCGCGAG
GCGATCGTCT TCGACACCGG CCATCAGGCA TACGTCCACA AGATGCTCAC CGGCCGCGCC
GACCTCGAGG GGCTGCGCAG CGCCGGCGGG ACCTCCGGCT ACCCGGACCG GCGCGAATCC
GCGCACGACG TGGTCGAGAA CTCCCATGCC TCCGGATCGG TCGCGTGGGC TCACGGCATC
GAGCGGGCCC ATCGTCTCCG CGGCGAGCCG GCCGTCGCCG TCGCCGTCGC CGGGGACGGG
GCGCTGACCG GGGGCGTGGG CCTCGAGGCG CTCAACGACC TGGGCTCGGA CCTCGGCTCG
CGCACCGTGG TGGTGCTCAA CGACAACACC CGCTCCTACG CCCCGACGGT CGGAGGGCTC
GCGGGCCACC TGCGCGACCT GCGCACGGGT GGCGCTGCTG CCGGCGGCGA GGTCGACGGG
GCGGCTGCCC GGCGCCGCCC CGACGCCGAG ACCGACCTGT TCAGCCGGCT CGGACTGACC
TACCTGGGCC CGATCGACGG GCACGACCTC GCCGCGCTCG CGCAGGCCTT CCACGAAGCG
CGCGAGGCGG CGGAGGATCC GGCCCGCGCC GGGGTCGTCG TCCATGTCGT CACCCGCAAG
GGGGCCGGCT TCGAGCGGGC CGAGGCCGAT GCCATGGACC ACTGGCACGC CACCGGCCCC
TTCGCGCTCG AGGCATCCGC CGGGCCCGAC GATCCGGTGC CGCCACCGGC GGACGAGACC
GCGCCGCCGA CCACCTGGAC CGCCCGGCTG GGCTCGGCGC TGCTCGAGGC CGCCGAGGAG
GACGAGCGGG TCGTGGCGAT CAGCGCGGCG ATGATCGATC CGGTCGGTCT CACGCCGATG
CAGCGCGCGC TGCCCGAGCG GGTGCTCGAC GTCGGCATCG CCGAGCAGCT CGCCGTGGAC
ACCGCTGCAG GGCTCTCCCA CGGGGGCGCC CGCCCCGTGG TCAGCCTCTA CTCGACCTTC
CTCAACCGTG CCTTCGACCA GCTGCTGCTG GACGTCGCCC TCCACGGGGA GGATGTCACG
CTCACGCTCG ACCGAGCGGG CGTGACCGGT GACGACGGCC CCAGCCACCA CGGCATCTGG
GACCTCGCGG TCGCCGCGCA GGTGCCCGGG CTCTCGCTGT GGGCACCGCG CGACGGCGAA
CGGCTCACCG AGTCCGTGCC GGCAGCGCTG GGCACCGCCG GCACCTCGAT CGTGCGCTTC
CCCAAGGGCG CCTGCCCCGC GCCGCTGCCC GCGCAGGAGC CGCATGCGGC CGGTGACGTG
CTCTGCGGGG ATCCCGCCGC CGAGATCGAC GTGCTGGTCG TGTCCATCGG CGCGCTCGCG
CACCGTGCGG TCGACGCCGC CGGGGCCGTG GCGCACGGCG ATGCGGAGCA GGGGGAGAGC
AGGCCCGGCC AGCACCGCCC GAACATCGTC GTCCTGGACC CCGTGCGCGC CCTGCCGCTG
GAGGAGGCGC TGCTCGATCT CGCCGCAGCC TCTCGCGCGG TGGTCACCGT GGAGGACGGC
GTCGCGGAGC GCGGCATCGG CGCGGCCCTC GCAGTGCGGC TCGCCCAGCG GGCCACCCGC
ACCGCACCTG CGCCCCTCCT GCGGGTGCTC GGGGTCGCGC AGGAGTTCAT CCCGCACGCG
AAGCGCGACG CGATCCTCAG CGAGAACGGT CTGGACGCCG CGGGGATCGC CCGCACCGTC
CGCACCGTGC TGGCCTGA
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| Protein sequence | MSTTQAHIVH TAGDVPDEVG IPADPAALRA LPATDLPGLA RTLRRRLVEI TSRTGGHLGP
NLGVVELTIA LHREFDSPRE AIVFDTGHQA YVHKMLTGRA DLEGLRSAGG TSGYPDRRES
AHDVVENSHA SGSVAWAHGI ERAHRLRGEP AVAVAVAGDG ALTGGVGLEA LNDLGSDLGS
RTVVVLNDNT RSYAPTVGGL AGHLRDLRTG GAAAGGEVDG AAARRRPDAE TDLFSRLGLT
YLGPIDGHDL AALAQAFHEA REAAEDPARA GVVVHVVTRK GAGFERAEAD AMDHWHATGP
FALEASAGPD DPVPPPADET APPTTWTARL GSALLEAAEE DERVVAISAA MIDPVGLTPM
QRALPERVLD VGIAEQLAVD TAAGLSHGGA RPVVSLYSTF LNRAFDQLLL DVALHGEDVT
LTLDRAGVTG DDGPSHHGIW DLAVAAQVPG LSLWAPRDGE RLTESVPAAL GTAGTSIVRF
PKGACPAPLP AQEPHAAGDV LCGDPAAEID VLVVSIGALA HRAVDAAGAV AHGDAEQGES
RPGQHRPNIV VLDPVRALPL EEALLDLAAA SRAVVTVEDG VAERGIGAAL AVRLAQRATR
TAPAPLLRVL GVAQEFIPHA KRDAILSENG LDAAGIARTV RTVLA
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