Gene Bfae_14220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_14220 
Symbol 
ID8399969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1601669 
End bp1603324 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content74% 
IMG OID644997489 
Producthypothetical protein 
Protein accessionYP_003154843 
Protein GI257068588 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.285162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAC GCCGCCAGCT GAGCTTCGAT GATCTGGGCA CCCCGCTGGC GGAGGCGACG 
CTCGTGGTGG TGGATCTGGA GACCACCGGC ACCGACCCGG CGGCCGACGC GATCACCGAG
ATCGGTGCGG TGAAGGTGCG CGGCGGCGAG GTGCTCGGCG AGTTCCGCAC CTTCGTGGAT
CCGGAACGGC CGATCCCCGC CTACATCGCC TCGCTCACGG GGATCACCGA CGCCGCCGTC
GCGGAGGCCC CGTCGATCCG CACGGTGCTG CCGATGTTCC TGGACTTCGC CGGGGACGCG
GCGCTGGTCG CCCACAACGC CCGGTTCGAC ATCGGCTTCC TCAGCGCGCA GGCGGCGGCC
TGCGAGATCA CCTGGCCGCG CCCCCGGGTG CTCGACACCC TCGCCCTGGC CCGCACCGTC
TTCCGCCGCG ACGAGGTCCG CGACCACAGG CTCTCCACCC TGGCCCGCCA CGTCGGCGCC
GGCATCACGC CCGATCACCG CGCCCTCTCC GACGCGAGGG CGACGGTCGA CGTGCTCCAC
GCGATCATCG AGCGGCTCGG GCCGAGCGGC GCCTCCACGC TCGAGGACCT CGGCACCGCG
CACCGTCGGG CCTCGCCCGT CCAGCTGCGC AAGAAGCACC TGGCCGAGGA CGTCCCCCCA
GTGCCCGGGG TGTACCAGTT CCTCGACGCG CAGGGGGCGG TGCTCTATGT GGGCACCTCA
CGCAACGTGC GCTCCCGCGT GCGCACCTAT TTCACCGCGG CGGAGACGCG GCGCAAGGTG
CTCGACATGC TGCCGCGGGC CGAGTCGGTC CGCGTCATCG AGTGCGCCAC CGCCACAGAG
GCCAGCATCC GGGAGCTGCG GATCATCGGC CGGGAGAAAC CGCCGTCGAA CCGGCACGGA
CTCCATCCCG AGAAGGCGCA CTGGCTGCGC CTGGGGCCCG GCACGCAGGG GCTGCGCACC
GCTCGCCTGG CCAAGCCGGA GCAGGACGGC TCCGCGCAGA TCGGGCCGCT CTCCTCCCGG
CACGATGCCG AGCCGCTGCG CGGCCTGCTC ACGGATGCGG TGATGGGGCG CGGGGCGGCG
CTCGACTCCC CCGGCCGCGC CCTCCCCGGC GGCGGGCACC GCGAGCGGAT CCGCCGGGCG
ATGACGGAGG ATCCCACCGA GGTGCTCGAT CATGTCGCGG GGCGGCTGCG CAGCCACGTC
GGCGCGGGCC GCTACGAGGA GGCGGAGAAG CTGCGTCGGC TCGCGCTCGC CTTCCTCACC
GCGGCCCGAC GAGCCTCCCG CCTGCGCGCC CTCGCCGAGG TGCCGCTGCT CATCGCCGCG
CGGCCCAGCA CGGAGGCCGT GATCGGCGGG CGGGGCTGGG AGCTGCTGGC GGTGCGGCAC
GGCCGCTTCT CGGGCACCAC CCTCGTCGCC GCGGGCAAGG ACCCGCTGCC CTTCGCCCGC
TCCCTCGCGA TGACCGGTCT CGGCGAGGCG GAGCTGGCCG CACCGCTGTG CCAGGGGTAC
CACCAGGAGG CGGAGATCCT GCTGGGATGG CTCGAGGCCG AGGGGGTGCG CACGGTGCTG
GTCGAGGGGA CCTGGCAGGT GCCGGCCCGT GCCCGGTTCG ACGCAGAGCA TCTCGCGCAG
CGCTTCGCGG CGACCGCGGA CGCCGCAGAG GCATAG
 
Protein sequence
MSARRQLSFD DLGTPLAEAT LVVVDLETTG TDPAADAITE IGAVKVRGGE VLGEFRTFVD 
PERPIPAYIA SLTGITDAAV AEAPSIRTVL PMFLDFAGDA ALVAHNARFD IGFLSAQAAA
CEITWPRPRV LDTLALARTV FRRDEVRDHR LSTLARHVGA GITPDHRALS DARATVDVLH
AIIERLGPSG ASTLEDLGTA HRRASPVQLR KKHLAEDVPP VPGVYQFLDA QGAVLYVGTS
RNVRSRVRTY FTAAETRRKV LDMLPRAESV RVIECATATE ASIRELRIIG REKPPSNRHG
LHPEKAHWLR LGPGTQGLRT ARLAKPEQDG SAQIGPLSSR HDAEPLRGLL TDAVMGRGAA
LDSPGRALPG GGHRERIRRA MTEDPTEVLD HVAGRLRSHV GAGRYEEAEK LRRLALAFLT
AARRASRLRA LAEVPLLIAA RPSTEAVIGG RGWELLAVRH GRFSGTTLVA AGKDPLPFAR
SLAMTGLGEA ELAAPLCQGY HQEAEILLGW LEAEGVRTVL VEGTWQVPAR ARFDAEHLAQ
RFAATADAAE A