Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_13710 |
Symbol | |
ID | 8399918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1545167 |
End bp | 1546933 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644997438 |
Product | uncharacterized membrane protein, putative virulence factor |
Protein accession | YP_003154798 |
Protein GI | 257068543 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.721621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCCCG CGGATTCCCG GCCCTCCCGC GCCGCGACCC GTCGCGGCGG GATCGCGCGC TCCGTGCTGC GGGGCGCGGG CGTGATCCTC GTGGTGACCG TCTTCGCCCG TATCGCCGGG TTCGTGCGCT ACCTCGTCTT CGGCGCGAGC GTGGGCGCCG GTGACGTGGG CACCGCCTAC ACCACCGCGA ACATGCTCCC GAACGTGCTG TTCGAGGTGG TCGCCGGCGG GATGCTCGCC GCCGTGGTGG TCCCGCTCAT CGCGGGACTG GTCCCCGAGG GCGACCCGGG CGGACCGCTC GAGGCCGACG CGACGGCAGA CCCCCGCACC GTCGAGCAGC TGCGCTCGGA GGAGACGTCC CGCACCGCCG AGGAGGGTGC GGCGCTCGCC GACCGGATCA CCTCCACGCT GCTGACCTGG ACCCTGCTGG GCACCGGCGT GCTCGCGGTC GTGGTGATCG CGCTGTCGGG CCCGCTGGCC CAGCTGCTGC TGGCCGCGGA GTCGCCCGGC GCCGCCGGGG TGCCGCTGGG GGCGACGCTG CTGCGCATCT TCGCGCTCCA GCTGCCGCTG TACGGGATCG CGGTGGTGCT GGCCGCCTAC CTGCAGGCCC GCAAGCGCTT CCTGTGGCCC GCGATGATGC CGCTGCTGTC CTCGGTGACG GTGATGATCG CCTACCGGGC CTACGCCCAC CTGGTGCCCC CGGTCGCCAC CGCCACCACG ATCGACCGGG CCCCGGTGTG GTGGCTCGGC TGGGGCACCA CCGCCGGGGT CGCGATCATG GCGGTCCCCG TGGTCGTGAC CGCGGTGCGC TCCGGGCTGC GGCTGCGCCC CTCGCTGTCC ATGCCGCCCG GCTACGGCCG GCGCGCCCTC GCCCTGGGCG GGGCGGGCCT CGGAGCCGTC GGCGCACAGC AGGCGGTGCT CGCACTGGTG ATGCTGCTCG CCATGCGCGC CGGGGGAGTG GGCACCCTGC CCGTCTTCCA GTACGCGCAG GCGCTGTACC TCCTGCCCTA CGCGGTGCTC GTCGTCCCCC TGGTCACGTC GGTGTTCCCG CATCTGTCGG AGCTGCGTCT GGTGGGGGAC CGCTCGGGCT TCGCGAAGAT CGCCGCCGCC TCCGTCCGCA CCGTCATGGT CGTCTCCGTG ATCGGTGCCG CGATGCTCGT GGCCGCCGGG CCGGCGCTCG AGCACTTCTT CCACCTCATC GACCGTGCCG GCGCGACCGG CGTCGGCTCC ACCACGGCCG GGCTCGCGCT GGGCCTGGTC GGCTTCGCGG TCTCGTTCCA GTGCACCCGG ATCCTCTCGG CCGCGCTGCG CGCCCGGGAC GCTCTGCTCG TCGGCTCCGT CGGCTGGGTG ATCGCCGGCG TGGTGATCCT CCTGGTGGTG CTGCCCAGCC CCGAACGCAC CGCGGCGGAG GCCTCGACGG CCTTCGGGCT GGCGATGGCG CTCGGCATGG CCGTGGCCGG GCTGGTGGGC CTGGCCCGGA TCGCGGACGT GCTCGAGCAC GGCGGCCATC TCCCTCTGGT GCGGCGCACC GCGATCATGG TCCCGCTCGC CGTGCTCGGC GGCGGGGTCC CCGGCCTCCT GCTCGCCCGC CGCCTGGTGA CCAGCGACGC CGGCGAGCTG CGCACGGTGC TGCTGGGGGC GCTGTGCGGC CTGGCCGCCG GGCTGCTCGC CGCGGCGCTG ATGGCCGCCG CCGATCCGGA GACCACCCGG AGGATGCTGC GGCGCCTGCG CGCAGGTCGC CACGGCGTGG CGAGGGCCGA GGGATGA
|
Protein sequence | MSPADSRPSR AATRRGGIAR SVLRGAGVIL VVTVFARIAG FVRYLVFGAS VGAGDVGTAY TTANMLPNVL FEVVAGGMLA AVVVPLIAGL VPEGDPGGPL EADATADPRT VEQLRSEETS RTAEEGAALA DRITSTLLTW TLLGTGVLAV VVIALSGPLA QLLLAAESPG AAGVPLGATL LRIFALQLPL YGIAVVLAAY LQARKRFLWP AMMPLLSSVT VMIAYRAYAH LVPPVATATT IDRAPVWWLG WGTTAGVAIM AVPVVVTAVR SGLRLRPSLS MPPGYGRRAL ALGGAGLGAV GAQQAVLALV MLLAMRAGGV GTLPVFQYAQ ALYLLPYAVL VVPLVTSVFP HLSELRLVGD RSGFAKIAAA SVRTVMVVSV IGAAMLVAAG PALEHFFHLI DRAGATGVGS TTAGLALGLV GFAVSFQCTR ILSAALRARD ALLVGSVGWV IAGVVILLVV LPSPERTAAE ASTAFGLAMA LGMAVAGLVG LARIADVLEH GGHLPLVRRT AIMVPLAVLG GGVPGLLLAR RLVTSDAGEL RTVLLGALCG LAAGLLAAAL MAAADPETTR RMLRRLRAGR HGVARAEG
|
| |