Gene Bfae_13310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_13310 
Symbol 
ID8399878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp1494850 
End bp1495776 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content74% 
IMG OID644997399 
Product4-diphosphocytidyl-2C-methyl-D-erythritol kinase 
Protein accessionYP_003154763 
Protein GI257068508 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0752344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGG CGCTGCAGCG GGTGGTGGTG CGCGCCCCCG GGAAGATCAA CCTCTCGCTC 
GGGGTGGGGC CGGTCGATGA CCGCGGCTAT CACGCCCTGG CGACGGTGTT CCAGGCCGTG 
GATCTCTACG AGACGATCAC CGCCACCCGG GCGGAGGCGC TGACCCTGGA GATGACCTCC 
GAGGTGGCGG GGGAGGTTCC GCTGGATGCC AGCAACCTCG CCCTGCGGGC GGCGGAGCTC 
CTGCGCGAGG AGTGCGCGCT CGGCGAGGGT GCTGCCCTGC ACATCCACAA ACAGGTCCCG 
ATCGCCGGCG GGATGGGCGG AGGGTCGGCC GATGCCGCCG CCGTCCTGGT GGCGCTGGAC 
CGCCTGTGGG GGCTCGACCT GGGTGCGGAG CGGCTGCGGC ACCTCGGCGC GCGCCTCGGG 
GCCGACGTCC CCTTCGCCAT GCTCGGCCAC ACGGCGCTGG GCCGCGGCAA CGGCGGGGAC 
CTCACCACGG TGCTCACCCA CGGGGAGTGG ACCTGGCTGC TGGCCGTCCC CGGCGGGCAT 
CTCTCCACCC CCGCGGTGTT CCGACGCTTC GACGAGATCG TCGCGCAGAC GGGGCGGGTG 
CCCTCCTCCC ACCCCGGCGT GGACGAGCGG CAGCTCCAGG CCCTCAGCAG CGGCAACATC 
GCCCTGCTCG CCGACACTCT GCACAACGAT CTCCAGGCGG CCGCGTTCGC CCTGCACCCC 
GGGCTGGAGC CGGTGGTCGA GGAGGCCGAG CGGCTCGGGG CGCCGGCGGC CCTGGTGAGC 
GGCTCCGGGC CGACGGTCGC GGTGCTCGTC GAGGACGAGG CGCAGGCACG ATCCCTCGCC 
GCCGGGCTGA GGCACGCCTC GCTGGTCGAG ACCTGCCTCG TGGCACGCGG CTCCGCGCCG 
GGAGCGAGCG TGCTCGAGGA GGAATGA
 
Protein sequence
MAQALQRVVV RAPGKINLSL GVGPVDDRGY HALATVFQAV DLYETITATR AEALTLEMTS 
EVAGEVPLDA SNLALRAAEL LREECALGEG AALHIHKQVP IAGGMGGGSA DAAAVLVALD 
RLWGLDLGAE RLRHLGARLG ADVPFAMLGH TALGRGNGGD LTTVLTHGEW TWLLAVPGGH 
LSTPAVFRRF DEIVAQTGRV PSSHPGVDER QLQALSSGNI ALLADTLHND LQAAAFALHP 
GLEPVVEEAE RLGAPAALVS GSGPTVAVLV EDEAQARSLA AGLRHASLVE TCLVARGSAP 
GASVLEEE