Gene Bfae_12990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_12990 
Symbol 
ID8399846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1461272 
End bp1462807 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content69% 
IMG OID644997367 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_003154732 
Protein GI257068477 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.232436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTCCGA AGGCGCGCGA GAGCGAGCCC TTCGGCGACG GCAGCACCAC CCTGTCGGTC 
ATCACCCGCA GCGTGACCAA CTTCGACCCC ACCACCAACC TCTTCTCGAA ATACCTCGAG
GAGAAGACCG GGGTGAAGAT CGAGTACGGC ACCGTGCCGC GCGGCGACGA GGGCGCCCCG
AAGGTCAACG CGATCCTCGC CGGCGGCGAT CTGCCGGACG CGCTCATGCT GGGTCCGGAG
TGGATGGGCG GCTTCACGAA GTCGGAGCTG TACGTCTACG GACAGCAGGG CCTGTTCATG
GCGCTGGACG AGCTCATCGA CCGGCTCGCC CCCGAGCTGC AGGAGGTCTT CGCCCTGAAC
CCGGAGTTCC GCAAGGCGTG GACCGCCCCC GACGGGGCGA TGTATGCCTT CCCCTCGGTG
AACCAGTGCT ACCACTGCAT GTCCTCCGAC TACCGCACCT GGGTCCACAC CCCGTCGATG
AAGGAGGCGG GGTTCAGCGA GCAGCCGGCG ACGCTCGAGG AGTTCGAGCA GATGCTCGCG
GCCATGAAGG AGGCGAACCC GGACATCCGC CCGATGACCG GCTGGAAGGA CAACCTCCCC
CTGCAGCTGC TCGGCGCGGC CCACCTGAAC ATGGGCACCA ATCAGCTGCG GCGCGACGGC
GACACCATCG TGTACACCCC CACGGATCCG GCGATGCGGG ACGTGTTCCG CGTGGCCGCC
CGCCTGGTGC GCGACGGGCT GCTGGACCGC AACGCCTTCA CCCAGACCAG CGAGCAGCTG
ATCCGCCTCG GCATGAACGA GGCCGGGAGC CAGGTCGGCG TCTGCCAGGG CGTCTCCCAG
GGCAACTTCG CCGATGTCGA CTACACCGAT CCGGACGCCC GCTACCGGGA GTTCGAGCCG
CTGCGCCCCT TCGCCGGCCC GCAGGGCGAT CCGGTCATCG CCTGGGACGA CCCGCCCGGC
GCCGGCTCGG TGGGTCTGGT GATCCCCGCC GACAGCGCCG ATCCGGAGAC CCTGGTGCGC
TGGGCGGACT TCCAGCTCGG CCTGCTGTCC ACGCTGAGCA TGCGGCTCGG CCCGCAGGAC
GAGTTCTGGA CCTGGGGTGA GGACGGCGAT CTCGGGATCG ACGACCGCCC CGCACTGTAC
AAGAAGGTCC TCCAGGAGGA GGAGATGCAG AACGTGGTGT GGGAGGAGCA CGGCGTGTTC
AACCTCGCCC TGGACGTGCG CCACGGCGAG GCGGTCGACG AGATGACCAG CTTCGAGCCG
ATGCTCTACC GCGCCGGGAA GCTGTACGAG GAGTTCGCGG CCCCGCCGGA GTCGCAGTTC
TACAGCCCGT TCTTCGACCA GGACCAGGCG GCCCAGGTCG GTGAGCTGCG CACGAACATC
GACAGCGCCT ATGTGCGCGG GGCGACCAGC ATGTGCCTGG GCGAGCTGGA CCCGGATTCC
GACGCGGACT GGGAGTCCTA CCTCACCTCG CTGTCGAACG CCGGGGCCGA TCAGTACCTC
GAGGTCCTCA CGGAGGCGGA CGCGAACCAG GTCTGA
 
Protein sequence
MGPKARESEP FGDGSTTLSV ITRSVTNFDP TTNLFSKYLE EKTGVKIEYG TVPRGDEGAP 
KVNAILAGGD LPDALMLGPE WMGGFTKSEL YVYGQQGLFM ALDELIDRLA PELQEVFALN
PEFRKAWTAP DGAMYAFPSV NQCYHCMSSD YRTWVHTPSM KEAGFSEQPA TLEEFEQMLA
AMKEANPDIR PMTGWKDNLP LQLLGAAHLN MGTNQLRRDG DTIVYTPTDP AMRDVFRVAA
RLVRDGLLDR NAFTQTSEQL IRLGMNEAGS QVGVCQGVSQ GNFADVDYTD PDARYREFEP
LRPFAGPQGD PVIAWDDPPG AGSVGLVIPA DSADPETLVR WADFQLGLLS TLSMRLGPQD
EFWTWGEDGD LGIDDRPALY KKVLQEEEMQ NVVWEEHGVF NLALDVRHGE AVDEMTSFEP
MLYRAGKLYE EFAAPPESQF YSPFFDQDQA AQVGELRTNI DSAYVRGATS MCLGELDPDS
DADWESYLTS LSNAGADQYL EVLTEADANQ V