Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_12980 |
Symbol | |
ID | 8399845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1459856 |
End bp | 1461160 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644997366 |
Product | alpha-L-fucosidase |
Protein accession | YP_003154731 |
Protein GI | 257068476 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0194467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACAG CCCCTGACGG CACCGCCGCC GACACCGATA TCCTCCGTCC CACCCCTGAA CAGCTGCAGT GGCAGAAGGA TGGCCTCGGC GTCTTCTTCC ACTTCGGGAT CAACACCTTC GCGGGCAAGG AGTGGAGCGA CGGCTCCGTG CCCTCCGACC TCTTCGCGCC CAGCGACCTC GACACCGACC AGTGGGTGCG CACCGCCCGC GACCTCGGCG CCGTCTACGT GATCCTCACC GCGAAGCATC ACGACGGCTT CTGCCTGTGG CCCACCGCGA CGACCGACTA CTCCGTCGCC TCCTCCCCGT GGCGCGACGG CACCGGCGAC GTGGTGGCGG AGCTCGCCGC CTCCTGCCGG AAGCACGGCA TGAAGCTCGG CCTGTACCTC TCGCCCTGGG ACCGCAACGC CCCGCAGTAC GAGGACCCGG AGGTCTACGA CGAGTTCTAC CTCACCCAGC TGCGGGAGCT GTGCACGAAC TACGGCGAGC TGTACGAGCT GTGGTTCGAC GGGGCGGGCT CCGCGGGCCG GGAGTACGCC TGGGACCGCA TCGGTGCGCT CATCGCCGAG CTGCAGCCCC AGGCGATGGT CTTCAACATG GGGCCGGCGA CCATCCGCTG GGTGGGCAAC GAGGACGGCC TGGCCTCCGA CCCGGTCGAG TACGTCACCC GCTCCACGGA TCTCAACCAG TACGACCCCG ACGTGGTGGA CCTGGGCCAG GCACGCTACC TGCCCCCGGA GTGCGACGTC TCCCTGCGCC GCGGCTGGTT CTGGCAGGAG GGAGAGTCGC CCAAGGACCT CGCTCACCTG CTGGGAATCC ATGACCGCTC GATCGGTCTG GGCGCCAACC TGCTGCTGAA CATCCCGCCG AACCGGGCGG GGCGGATCGG CGAGGACGAT GCGGCACGCT GCCGTGAGCT GCGTGCGGCG CTGGACGCCC GCTTCGGCTC CCCACAGCCC GCCGCGCTGT CCCAGGAGAC GGACTCGGTG GTGCGCCTGG ACCTGCCGGC CTCCGCGGAG CAGGGCTTCG ACCACATCGA GCTGCGCGAA CGGCTCGAGG AGGGTCAGCG CGTCCGCTCC CACCGCATCA CCACGGACCA GGGGCAGCTG GTCGCCGAGG GCGGCACCAT CGGCGTGCGT CGCCTCCACC GGCTCCCTCA GCCGCTGCAC GCCCGCACCC TGCGCGTCGA GCTGGTGGGC GAGGGAGCGG TGCTGGAGGA TGCCTGCGTG CACGATGCCA GCGGCGCGCC CGTGCCCGCG CTGGACGAGT CGAACAAAGC CCCGTCGACC GCTCCGGTGG ACTGA
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Protein sequence | MDTAPDGTAA DTDILRPTPE QLQWQKDGLG VFFHFGINTF AGKEWSDGSV PSDLFAPSDL DTDQWVRTAR DLGAVYVILT AKHHDGFCLW PTATTDYSVA SSPWRDGTGD VVAELAASCR KHGMKLGLYL SPWDRNAPQY EDPEVYDEFY LTQLRELCTN YGELYELWFD GAGSAGREYA WDRIGALIAE LQPQAMVFNM GPATIRWVGN EDGLASDPVE YVTRSTDLNQ YDPDVVDLGQ ARYLPPECDV SLRRGWFWQE GESPKDLAHL LGIHDRSIGL GANLLLNIPP NRAGRIGEDD AARCRELRAA LDARFGSPQP AALSQETDSV VRLDLPASAE QGFDHIELRE RLEEGQRVRS HRITTDQGQL VAEGGTIGVR RLHRLPQPLH ARTLRVELVG EGAVLEDACV HDASGAPVPA LDESNKAPST APVD
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