Gene Bfae_12960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_12960 
Symbol 
ID8399843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1457393 
End bp1458877 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content71% 
IMG OID644997364 
Productmalate:quinone oxidoreductase 
Protein accessionYP_003154729 
Protein GI257068474 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0120634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACC TGGACGTGAC CCGCGCAGAT GCGGTGCTGA TCGGCGGCGG GATCGCCAGC 
GCGACCCTCG CCGCGATGCT CACGGAGCTC GAACCGAGCT GGGACATCGT GGTCCTCGAG
CGCCTCGAGT CCCTCGGCGC CGAGTCCAGC GACGCCTGGA ACAACGCGGG CACCGGCCAC
AGCGCCCTGT GCGAGCTGAA CTACACCCCG CAGGACGTCG ACGGCTCGGT GAGCCCCGCC
AAGGCGATCT CGATCAACGA GCAGTTCCAG GTCTCCCGGC AGTTCTGGGC CCACCTGGTG
GAGAACGACC GCATCGGCGA TCCCAGCCGC TTCATCCACA CCGTGCCGCA CATGAGCTTC
GTGCACGGGA TGGAGAACGT GGACTACCTG CGCCGCCGCC ACGAGGCGCT GACCGCGAAC
CCGCTGTTCG ACCGGATGGA GTTCACCACC GAGCATGCGC AGCTGGCGCA GTGGGCGCCG
CTGGTCTCCG AGGGCCGCCC GGTCACCGAG ACGATCGCCG CGACCCGCTC CCCCGATGGG
ACCGACGTCG ACTTCGGGGC GCTGACCCGC GAGATGCTCG GCTTCGCCTC GCGCACCGGC
ACCACCGTCT CCACCGGCTC CGAGGTGGTG GACCTGCGCC GGATGGGCAC CGACTGGGGC
GTGATGGTGC GGTCCACGAC GGATGATGCG CTGCGCGTGG TGCGGGCGCC GTTCGTCTTC
GTCGGGGCCG GCGGCTATGC GCTGCCCCTG CTGCAGAAGT CCGGGATCGA CGAGATCCGC
GGCTTCGGCG GCTTCCCGAT CTCCGGCCAG TGGCTGCGCT GCACCGACCC GGAGGTCATC
GCCCGCCACG ATGCGAAGGT GTACGGCAAG GCGGCCGTCG GCGCCCCGCC GATGAGCGTC
CCCCACCTCG ACACCCGCTT CGTGGCCGGG GAGCGCTCGC TGATGTTCGG CCCGTATGCG
GGCTGGTCCC CGAAGTTCCT CAAGACCGGC CGCTGGACGG ACCTGCTCGA GTCGGTCAAG
CCCTCCAACG TCACCCAGAT GATGGCGGTC GCCCCGCCGA ACCTCGACCT CATGGTCTAC
CTCGGCTCGC AGCTCGCCGC GACCCACCAC CAGCGCTTCG AGGCGCTGCT GGAGTACATG
CCCTCGGCCC GCCCGGAGCA GTGGGAGGAG GTCACCGCCG GCCAGCGCGT CCAGGTGATC
GCCCCGGACC GGAAGAAGCA CGGCGTGCTG CAGTTCGGCA CCCAGCTGAT CACGGCCGCC
GACGGCTCGA TCGGCGGCAT GCTCGGCGCC TCCCCCGGCG CCTCCACCGC CACCAGCATC
ATGCTCGGTC TGCTGGAGAA GATGTTCCCG CAGCGCATCG AGCAGTGGCG GCCCGCCCTG
ACCCAGATGG TGCCCAGCTG GGGTCGGTCG CTCTCGGACG ACGCCGAGGA GGCGCACCGG
ACGCTGGACC GCACCGCCGA CGCGCTGGGC CTGAGCCACT CCTGA
 
Protein sequence
MSDLDVTRAD AVLIGGGIAS ATLAAMLTEL EPSWDIVVLE RLESLGAESS DAWNNAGTGH 
SALCELNYTP QDVDGSVSPA KAISINEQFQ VSRQFWAHLV ENDRIGDPSR FIHTVPHMSF
VHGMENVDYL RRRHEALTAN PLFDRMEFTT EHAQLAQWAP LVSEGRPVTE TIAATRSPDG
TDVDFGALTR EMLGFASRTG TTVSTGSEVV DLRRMGTDWG VMVRSTTDDA LRVVRAPFVF
VGAGGYALPL LQKSGIDEIR GFGGFPISGQ WLRCTDPEVI ARHDAKVYGK AAVGAPPMSV
PHLDTRFVAG ERSLMFGPYA GWSPKFLKTG RWTDLLESVK PSNVTQMMAV APPNLDLMVY
LGSQLAATHH QRFEALLEYM PSARPEQWEE VTAGQRVQVI APDRKKHGVL QFGTQLITAA
DGSIGGMLGA SPGASTATSI MLGLLEKMFP QRIEQWRPAL TQMVPSWGRS LSDDAEEAHR
TLDRTADALG LSHS