Gene Bfae_12770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_12770 
Symbol 
ID8399824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1438563 
End bp1439972 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content75% 
IMG OID644997345 
ProductD-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 
Protein accessionYP_003154710 
Protein GI257068455 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 
TIGRFAM ID[TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCGA GCGCACGTGA ACGGATCTGG CGCACCGCCG CGATCGTGAT GTGCGCGGCG 
GTGCCCGCGA GCTTCTACCT GCTCGGCGAC CTCACCGACG CCTTCCCCGG CGTCCTCACC
GTGCGCACCG AGCAGGAGGC GCCGGCCGCC GGCCCCCGCG CGGTCTCCGA GGACTGGGAG
CGCCTCGAGG CGCAGGACCT GCTGCCCGCC CCCACCTCCC CGGCGCCCGA GGTCGACCCG
GCTGACCTCG AACGACGGAT GGCGGCGCAC GCGGAGCTGC CGGTGGTCGA GGGCGGGCTC
GCCTTCAGCG TCGTCGACGC GGGGACCGGG CAGATCCTCG CCTCCCGCGA CCCCGACACC
GCGCTCGTGC CCGCCTCGAC CCTCAAGCTG CTCACCGCCG CCGCGGTGCT GCGCGAGTAC
AGCGGGGACG AGGTGCTGCG CACCCGGGCC TCCGTCGAGG ACGGCGTGAT CACCCTCATC
GGCGGCGGTG ACATGACTCT CACCGAGGAG CGGCTGCGCA CCCTCGCGAC CGAGGCGGCG
AGCCTCGCCA CCGAACAGGG CGCCGATGAG GTCACCGTGG CGCTGGACGA CACCTTCCTC
GTCGGCGGCA GCAACGAGGC GTGGGGCAAC AACGGGCCGG CCGGCGGCTG GGTGACCCCC
ACCGCCTCCC TCGCCCTGGA TGAGGGCTGG CTCGACGAGG AGCTGTACGG ACCCAAATCC
ACCACGCCCG CCCGCGACGC CGCCGAGCGC TTCGCCGAGC TGCTCGGCGA GGCCGGCCTG
ACCGTCACGG GGAAGATCGC CGCGGCCGAG GCGCCGCAGG AGGCGCCGAC CGTCGAGGTC
ACCTCCGCGC CGCTCGAGGA GATCGTCCGC CACACCCTGC TGATCTCGGA CAACACCACC
GCCGAGCTGC TCGCCCACCT GGTGGCCCAC GCCCGCGGCG AGGACACCAC CCCGGCCGGG
GCCGCCGCCG CCGTGGAAGC GGAGATCCGC GAGCTCGCCG CCGAGATCGG CGTGCCCGAG
GACGCCCTGG AGACCCTCGA GATCCACGAC GGCTCGGGCC TGTCCCGACA GAACCGGGTG
CCGCCCGCGC TGCTCTCGGC GGTCCTCGCG GAGGTCGCCT CCGGCGAGGT GCCCACGCTC
GAGCAGATCC TCTTCGACGT GCCGATCGCA GGACTGTCCG GCACCCTCGC GGACCGCTTC
GACGCGGCGG GCACCGAGGA CGCGACCGGC CTGGTGCGCG GCAAGACCGG CTACCTCGGC
GGCGCCGCCA CCCTCGCCGG CGTCACCGTG CTGCCCGACG GTCGCACGGT CGGCTACGCG
ATCGCGGTGC ACGGCTTCGA CGGCGTCGAT GCCCCCGCCG CACGCGCCGC GGTGGACGCG
GTCGCCGCCG AGATGGTGCA GGAGGACTGA
 
Protein sequence
MASSARERIW RTAAIVMCAA VPASFYLLGD LTDAFPGVLT VRTEQEAPAA GPRAVSEDWE 
RLEAQDLLPA PTSPAPEVDP ADLERRMAAH AELPVVEGGL AFSVVDAGTG QILASRDPDT
ALVPASTLKL LTAAAVLREY SGDEVLRTRA SVEDGVITLI GGGDMTLTEE RLRTLATEAA
SLATEQGADE VTVALDDTFL VGGSNEAWGN NGPAGGWVTP TASLALDEGW LDEELYGPKS
TTPARDAAER FAELLGEAGL TVTGKIAAAE APQEAPTVEV TSAPLEEIVR HTLLISDNTT
AELLAHLVAH ARGEDTTPAG AAAAVEAEIR ELAAEIGVPE DALETLEIHD GSGLSRQNRV
PPALLSAVLA EVASGEVPTL EQILFDVPIA GLSGTLADRF DAAGTEDATG LVRGKTGYLG
GAATLAGVTV LPDGRTVGYA IAVHGFDGVD APAARAAVDA VAAEMVQED