Gene Bfae_12730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_12730 
Symbol 
ID8399820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1434907 
End bp1435992 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content69% 
IMG OID644997341 
Productcarbohydrate ABC transporter ATP-binding protein 
Protein accessionYP_003154706 
Protein GI257068451 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.306152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAG TGACTTTCGA CAACGCGTCG CGCGTGTACC CGGGCCAGGA GCGCCCGGCC 
GTCGACAACC TGAACATCGA AGTCGGCGAC AGCGAGTTCC TCGTCCTCGT CGGCCCCTCG
GGCTCCGGCA AGTCGACCGC CCTGCGCATG CTCGCCGGCC TCGAGGAGAT CGATGCCGGC
CGCATCCTCA TCGGCGACCG CGACGTCACG GACGTGCCGC CGAAGGACCG CGACATCGCG
ATGGTGTTCC AGAACTACGC GCTGTACCCG CACATGACGG TCGCCGACAA CATGGGCTTC
GCCCTGAAGA TCGCCGGCAC CCCGAAGGCC GAGATCCGCA AGCGCGTCGA GGATGCCGCC
GCGATCCTGG ACCTGTCCGA GTACCTCGAC CGCAAGCCGA AGGCGCTCTC GGGCGGTCAG
CGCCAGCGTG TGGCCATGGG TCGCGCGATC GTGCGCTCCC CGCAGGTGTT CCTCATGGAC
GAGCCGCTGT CCAACCTCGA CGCCAAGCTG CGTGTGGCCA CCCGCACCCA GATCGCGTCG
CTGCAGCGTC GCCTCGGCGT CACCACGGTC TACGTCACCC ACGACCAGAC CGAGGCCATG
ACGATGGGCG ACCGCGTCGC GGTCCTCGAC CACGGCGTCC TGCAGCAGCT GGATTCCCCG
CGCCGCATGT ACGACCACCC GAACAACGTC TTCGTCGCGG GCTTCATCGG CTCCCCCGCC
ATGAACCTGT TCGACACGAA GCTCACCGAT CGGGGTGTGG AGTTCGGCGG CGCCGTGGTG
CCCGTGGACC GCTCCACCCT CTCCGAGACG AACGAGACCT CGGTCACCGT GGGCGTGCGC
CCCGAGGACC TCGAGCTGGT CTCCGACGAC CAGGGCATCG CCATCGAGGT CGACCTCGTC
GAGGAGCTCG GCGCCGACGC CTTCATCTAC GGCCGCCGCG AGGGCGCCGA GGAGACGGAC
AAGCCGTTCA TCGCTCGTGT CGACGCGCGT CGTCCCCCGG TCAAGGGCGA GACGGTCTAC
TTCCGTCCGG CCGAGGGGCA CATCCACCTC TTCGACGCGA AGACGGGTCA GCGCCTGGGC
GACTGA
 
Protein sequence
MATVTFDNAS RVYPGQERPA VDNLNIEVGD SEFLVLVGPS GSGKSTALRM LAGLEEIDAG 
RILIGDRDVT DVPPKDRDIA MVFQNYALYP HMTVADNMGF ALKIAGTPKA EIRKRVEDAA
AILDLSEYLD RKPKALSGGQ RQRVAMGRAI VRSPQVFLMD EPLSNLDAKL RVATRTQIAS
LQRRLGVTTV YVTHDQTEAM TMGDRVAVLD HGVLQQLDSP RRMYDHPNNV FVAGFIGSPA
MNLFDTKLTD RGVEFGGAVV PVDRSTLSET NETSVTVGVR PEDLELVSDD QGIAIEVDLV
EELGADAFIY GRREGAEETD KPFIARVDAR RPPVKGETVY FRPAEGHIHL FDAKTGQRLG
D