Gene Bfae_12520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_12520 
Symbol 
ID8399799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1406714 
End bp1408120 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content71% 
IMG OID644997320 
Productpredicted membrane protein 
Protein accessionYP_003154685 
Protein GI257068430 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.360296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAGC CCCCACCCCC GCCGCAGCAG CCCCGACCTC TCCCGCACAC GCCCCACCGG 
CGCCCCCGCC CCGGTGCCCC GAGCGTCGCT CCCGGCGCGC CGTCCTTCCA GGCGCAGCCC
CGCTACCAGG ACTACGGGAA CCCCCGCGCC TACGACACCT CGGTGCGCCC GGCGTCGGGC
CTCACCGCGG CCCGGTACGC GCCGGCCCAG ATCCAGCGGC CTGCTCAGGC GCAGCCGCCC
TCCGCGTGGT CCACCCAGAT GCGCCGGGCG GCGGAGGTCT CGCAGGAGGC CACGAAGGTC
CCGAAGGTCA GCATCGCGGT GTGGCTCGCG CTGATCGTGC TCGGGGTCGC CGTGCTGTGC
GTGCTGGGCT TCTTCCTCCT CGAGTTCGTG CTCACCTCGA GCTCGAGCCC GGTGTGGTGG
CCGGTCACGG CCTTCCTCGC CTCGATCTCC CTGCTCGTCA TCGCGGGGGT CATGATCCTC
GCGGACCGCT GGGACCCCCA GCCGCTCCCC CTGCTGCTCA TCGCGGTGCT CTGGGGCGCG
GCGATCGCTG CAGCGCTGAG CTACATGCTG AACACGCTGA ACTCGCAGCT CGTCTACATC
GCCACCGGCA GCCAGGCGGC CGCCGCGTTC GCCGGCCCCG TCCTCAGCGC CCCGCTGGTC
GAGGAGACCT CCAAGGGTCT GGGTCTGCTG CTGCTCATGC TTCTGGCGCG CCGCTACTTC
AACGGCCCGC TCGACGGCCT GATCTACGGC TCGCTGATCG GCGGCGGGTT CGCCTTCACC
GAGAACATCC TCTACTACAC CAGCCAGCTG GAGGCCACCG GCGCCGGCGG GATGCTCGTC
CTCTTCCTCA TGCGCGGCGT GATGAACATC TTCGGCCACG CCATCTACAC CTCGCTCACC
GGAATCATCG TCGGCTTCGT GGTCCGCAAG TGGGGCACGG CGATGGGGTT CCTGGTGTTC
CTCCCGGCGC TCCTGCCCGG CATGCTCCTG CACGGCGGCT GGAACCTCGG CTCCGTGCTG
ATCGACGTGA TCGCGGTGAT CCTGCTGCTG TACGCCGTGA AGGCGCTGAT CTCGCTGCTG
TGGCTGATCA CGATCGCCGT GCTGATCTGG GACGAATCGC GCCTGACCCG GGTCCGGCTC
GGCGACTACG CGAACCACGG CTGGCTCACC CATGAGGAGG TCGACATGCT CGCGACCTGG
AAGGGGCGGC GCGAGGGGAA GCGCTGGGCC TCCCAGATCG GGGCGAGGCC GGTGATGAAG
AGGTTCATCC GCGAGAGCGC CGATCTGGCC TCGATCCGCC AGCGCCTGCT GGCCGACGGG
GCGAACCCCC GCGTCGTCGA GATCGAGCGG AACCTCCTGG GCCGCCTCAC CGCGAACCGG
CGCGAGCTGC TCTCCTCCGC CCGCTGA
 
Protein sequence
MSQPPPPPQQ PRPLPHTPHR RPRPGAPSVA PGAPSFQAQP RYQDYGNPRA YDTSVRPASG 
LTAARYAPAQ IQRPAQAQPP SAWSTQMRRA AEVSQEATKV PKVSIAVWLA LIVLGVAVLC
VLGFFLLEFV LTSSSSPVWW PVTAFLASIS LLVIAGVMIL ADRWDPQPLP LLLIAVLWGA
AIAAALSYML NTLNSQLVYI ATGSQAAAAF AGPVLSAPLV EETSKGLGLL LLMLLARRYF
NGPLDGLIYG SLIGGGFAFT ENILYYTSQL EATGAGGMLV LFLMRGVMNI FGHAIYTSLT
GIIVGFVVRK WGTAMGFLVF LPALLPGMLL HGGWNLGSVL IDVIAVILLL YAVKALISLL
WLITIAVLIW DESRLTRVRL GDYANHGWLT HEEVDMLATW KGRREGKRWA SQIGARPVMK
RFIRESADLA SIRQRLLADG ANPRVVEIER NLLGRLTANR RELLSSAR