Gene Bfae_12000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_12000 
Symbol 
ID8399747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1355130 
End bp1356386 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content71% 
IMG OID644997269 
Productalpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase 
Protein accessionYP_003154634 
Protein GI257068379 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCAGC GCCAGATCCC CCGCCCCGCC GAGATCCTCG AGCTGATGAC GTTCAAGCCG 
ATCGACCTCG ACGGCAAGCG CCGCCGCCTC TCCTCGGCGC TGACCATCGA GGATCTGCGG
ACGATCGCCA AGCGGCGCAC CCCCGCGGCC GCCTTCGACT ACACCGACGG AGCCGCCGAG
GGCGAGATCT CGATGGACCG CTCCGTCGAA GCCTTCGAGG ACATCGAGTT CCACCCCTCG
ATCCTGCACG ACGTCTCCAC GGTGGACACC ACCGCGCAGA TCCTCGGCGG CAGCTCCGCA
CAGCCCTTCG GCATCGCCCC CACCGGCTTC ACCCGGCTCA TGCAGACCGA GGGCGAGATC
GCGGGCGCCT CCGCCGCGGG AGCGGCCGGC ATCCCCTTCA CCCTCTCGAC GCTGGGCACC
ACCTCGATCG AGGAGGTCCA CGCCGCGAAC CCGCTGGGCC GCAACTGGTT CCAGCTCTAC
GTGATGAAGC AGCGCGAGAT CTCCTACGGC CTCGTCGAGC GGGCGGCACA GGCGGGCTAC
GACACCCTGT ACTTCACCGT GGACACCCCC GTGGCCGGCG CCCGGCTGCG CGACTCCCGC
AACGGCTTCT CCATCCCGCC GCAGCTGAGC CTCGGCACCG TCATCAACGC GATCCCGCGC
CCCTGGTGGT GGTGGGACTT CCTCACCACC GCGAAGCTCG AGTTCGCCTC CCTGTCCCAG
ACCGGCGGCA CCGTCGGCGA GCTGCTCGAC TCCGCGATGG ATCCCTCGAT CGACGTCGAG
GACCTCGCCG AGATCCGCCG CATGTGGCCG GGGAAGTTCG CGGTCAAGGG CGTCCAGACG
CTCGAGGACG CGAAGAAGCT CGCGGATCTC GGGGTCGACG CGATCGTGCT GTCCAACCAC
GGCGGCCGGC AGCTGGACCG GGCCCCGGTC CCCTTCCACC TTCTGCCCCA GGTCGCGCGC
GAGGTGGGCG ATGACATGGA GATCATCCTG GACACCGGGA TCCGCAGCGG CGCCGACATC
GTCGCCGCGA TCGCGCTCGG CGCGGACTTC ACCCTCATCG GCCGCGCCTA CCTGTACGGC
CTCATGGCCG GCGGCCGGCA GGGCGTGGAC CGGGCGATCG CGATCCTCTC CGATCAGGTG
GAGCGCACCA TGAAGCTGCT GCAGGTCCCC ACCCTGCAGG ACCTCGGCCC CGAGCACGTC
ACCCAGCTCA GCCGGGTGCG CCGCCTCGAG GAGGAGCCCC GCCCCCGCGT GCGCTGA
 
Protein sequence
MVQRQIPRPA EILELMTFKP IDLDGKRRRL SSALTIEDLR TIAKRRTPAA AFDYTDGAAE 
GEISMDRSVE AFEDIEFHPS ILHDVSTVDT TAQILGGSSA QPFGIAPTGF TRLMQTEGEI
AGASAAGAAG IPFTLSTLGT TSIEEVHAAN PLGRNWFQLY VMKQREISYG LVERAAQAGY
DTLYFTVDTP VAGARLRDSR NGFSIPPQLS LGTVINAIPR PWWWWDFLTT AKLEFASLSQ
TGGTVGELLD SAMDPSIDVE DLAEIRRMWP GKFAVKGVQT LEDAKKLADL GVDAIVLSNH
GGRQLDRAPV PFHLLPQVAR EVGDDMEIIL DTGIRSGADI VAAIALGADF TLIGRAYLYG
LMAGGRQGVD RAIAILSDQV ERTMKLLQVP TLQDLGPEHV TQLSRVRRLE EEPRPRVR