| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_11990 |
|---|
| Symbol | |
|---|
| ID | 8399746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 1353325 |
|---|
| End bp | 1355064 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644997268 |
|---|
| Product | dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_003154633 |
|---|
| Protein GI | 257068378 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.885522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCG ACGACGAGAC CACTGCCCCT GCCACCACTC GGGATTCCGC CCCCGACATC
AAACCGCGCA GCCGCCAGGT CACCGACGGC CTGGGCGCGA CGGTCTCGCG CGGCATGCTG
CGCGCGGTGG GCATGGGTGA CGCTGACTGG GACAAGCCGC AGATCGGCAT CGCCAGCTCC
TGGAACGAGA TCACCCCCTG CAACCTGTCG CTGGACCGCC TCGCGCAGGC GGCGAAGGAG
GGGGTGCATT CCGGCGGCGG CTACCCGCTG CAGTTCGGCA CCATCTCCGT CTCCGACGGC
ATCTCCATGG GGCACGACGG CATGCACTAC TCGCTCGTCT CCCGCGACCT GATCGCCGAC
AGCGTCGAGA CGGTGATGAG CGCCGAGCGG CTCGACGGCT CGGTGCTGCT GGCCGGCTGC
GACAAGTCCC TGCCCGGCAT GCTGATGGCC GCGGCCCGTC TGGACCTGGC CAGCGTGTTC
GTCTATGCGG GCACGATCAT GCCGGGCCGG GTCTCCCTCT CCACCGGAGA GGAGAAGGAC
GTGACGATCA TCGACGGCTT CGAGGCCGTC GGCGCCTGCG CGCGCGGGCT GATGAGCCGG
GAGGACGTCG GCCGCATCGA GCGCTCGATC TGCCCGGGCG AGGGCGCCTG CGGCGGCTAC
TACACGGCCA ACACCATGTC GACGGTCGCC GAGGCCATCG GCATGTCGAT CCCCGGCTCC
GCCACTCCCC CCTCGGCCGA TCGCCGCCGC GACGCGGACG CACGGCGCGC GGGCGAGGCC
GTGGTCGGCA TGCTCCGCCA GGGCATCACC AGCCACGACA TCATGAGCAA GGCCGCCTTC
GAGAACGCGA TCGCGGTGGT CCAGGCCTTC GGCGGCTCGA CCAACGCGGT GCTGCACCTG
CTCGCGATCG CGCACGAGGC GGAGGTGGAC CTCACCCTGG ACGACTTCGC CCGGATCGGC
GCGAAGGTCC CCCACCTCGC CGATCTCAAG CCCTACGGCC GTTACGTGAT GAACGACGTC
GACCACGTGG GCGGCATCCA GGTGGTGATG AAGACGCTGC TGGACGAGGG CCTGCTGGAC
GGGGACTGCC TGACGGTCAC CGGGCGCACG ATCGCCGAGA ACCTCGAGGT GCTGCAGCCG
CGGCCGGCCG ACGGCACGGT GCTGCGCCCG GCCTCGGCGC CGATCGCCCC CACCGGCGGC
ATCACGATCC TGCACGGCTC CCTGGCGCCC GAGGGCGCGG TGGTGAAGTC CGCCGGCTTC
GAGGAGGACG TCTTCGAGGG CACGGCGCGC GTGTTCGAGC GCGAGCAGCA CGCCCTGGAT
GCCCTGAACG ACGGCACCAT CGACCACGGC GACGTGGTGG TGATCCGCTA CGAGGGCCCC
AAGGGCGGGC CCGGCATGCG CGAGATGCTC GCGATCACCG GCGCGATCAA GGGCGCGGGC
CTGGGCAAGG ACGTGCTGCT GATGACCGAC GGACGCTTCT CCGGCGGCAC CACCGGGCTG
TGCGTCGGGC ACATCGCGCC CGAGGCCGTG GACGGCGGCC CGATCGCCGT CGTGCGGGAC
GGGGACCGGA TCCGCCTGGA CGTGAGCACC GGGGCGCTCG ACCTGCTCGT GGATGAGGAG
GAGCTGGCCG CCCGCTGGGA GGGCTGGGAG CCGCTGCCGC CGAAGTTCAC CAAGGGCGTG
CTGGGCAAGT ACGTGCAGCT GGTGAAGTCC GCGTCCCGCG GAGCGATCCT CGGGGAGTGA
|
|---|
| Protein sequence | MDADDETTAP ATTRDSAPDI KPRSRQVTDG LGATVSRGML RAVGMGDADW DKPQIGIASS
WNEITPCNLS LDRLAQAAKE GVHSGGGYPL QFGTISVSDG ISMGHDGMHY SLVSRDLIAD
SVETVMSAER LDGSVLLAGC DKSLPGMLMA AARLDLASVF VYAGTIMPGR VSLSTGEEKD
VTIIDGFEAV GACARGLMSR EDVGRIERSI CPGEGACGGY YTANTMSTVA EAIGMSIPGS
ATPPSADRRR DADARRAGEA VVGMLRQGIT SHDIMSKAAF ENAIAVVQAF GGSTNAVLHL
LAIAHEAEVD LTLDDFARIG AKVPHLADLK PYGRYVMNDV DHVGGIQVVM KTLLDEGLLD
GDCLTVTGRT IAENLEVLQP RPADGTVLRP ASAPIAPTGG ITILHGSLAP EGAVVKSAGF
EEDVFEGTAR VFEREQHALD ALNDGTIDHG DVVVIRYEGP KGGPGMREML AITGAIKGAG
LGKDVLLMTD GRFSGGTTGL CVGHIAPEAV DGGPIAVVRD GDRIRLDVST GALDLLVDEE
ELAARWEGWE PLPPKFTKGV LGKYVQLVKS ASRGAILGE
|
|---|
| |