Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_11460 |
Symbol | |
ID | 8399694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1293448 |
End bp | 1294599 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644997217 |
Product | predicted secreted protein containing a PDZ domain |
Protein accession | YP_003154582 |
Protein GI | 257068327 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0905061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGCACA ATGTCGGGGT GACCGCAGCA CCCACCCGAC CCTCCCGCGC CCGCCGGGTG CGGGCCGTCC TCGCCCGTGC CCTCGACGAC GCACAGCTGG CCCGGCCGAG GCTGGCGCTG GGCTCCCTGC TCCTGCTGTG CGTGATGATC CTCGTCGGCT CCCTGCTGCC GGTGCCGTAC GTCATCGAAC GGCCCGGCCC CGCGATCGAC GTGCTCGGCG ATTACCAGGA CGAGGAGATC CTCGTCATCG ACGGGGCGCA GACCCACGAG ACGGACGGCG CGCTGATGAT GACGACGGTG TCGGTCGACG GCGGCCCCGG CTACCGGGTG ACCCCGGTCG AGGTGGTCGC CGCCTGGTTC GACCGCACGA AGATGGTGCT GCCGCGCGAG GCGGTCTTCC CCGAGGGCCA GACCCGCGAG GAGACCACCC TCACCAACAC CGCAGCGATG AGCACCTCCC AGCAGGGGGC GGTCGCCGTC GCGCTGGACG AGCTGGGGAT CGACCACGAG CAGGTGGTCA TGATCGCGGG CGTCGAGGAG GGCGGCGCGG CCGAGGGCAC CCTCGAGGGC GGGGACGTGA TCGTCTCCGT CGACGGCGAG GCGGCGAGCG GGGTCGAGGC GTACCGGGAG CTGATCCGGG CCGTGCCCGA GGGGGAGCCG ATCCCCATGA CCGTGCGGCG CGACGGCACC GAGATCGAGC TCGAGGTCCC CACCGCGGAG GTGGACGGCG CCTCGATGAT GGGCGTGGTG CTGGCCGAGG GCTACGAGTT CCCCATGGAC GTCGACATCG CGGTGGGGGA CATCGGCGGC CCCAGCGCCG GCATGATCTT CTCCCTGTCC GTCTACGACG AGCTCACCCC CGGGGCGCTG ACCGGCGGGC ACCGCATCGC CGGCACCGGC ACCATCGCCA CCGACGGCAC CGTCGGCCCG ATCGGCGGGA TCCGCCAGAA GATGGTCGGC GCCGCCGAGT CCGACGCCGA ATTCTTCCTG GCCCCCAGCC AGAACTGCGA CGAGGTGGTG GGCTACGCGC CCGACGACCT CGACGTGGTC GCGGTCTCGA CCTTCGAGGA GGCGCTGGAC GCCACCGAGA CGATCGCCGG GACCGGCAGC ACCGAAGGAC TTCCCACCTG TGAGGACGTG AACAGCAAGT GA
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Protein sequence | MGHNVGVTAA PTRPSRARRV RAVLARALDD AQLARPRLAL GSLLLLCVMI LVGSLLPVPY VIERPGPAID VLGDYQDEEI LVIDGAQTHE TDGALMMTTV SVDGGPGYRV TPVEVVAAWF DRTKMVLPRE AVFPEGQTRE ETTLTNTAAM STSQQGAVAV ALDELGIDHE QVVMIAGVEE GGAAEGTLEG GDVIVSVDGE AASGVEAYRE LIRAVPEGEP IPMTVRRDGT EIELEVPTAE VDGASMMGVV LAEGYEFPMD VDIAVGDIGG PSAGMIFSLS VYDELTPGAL TGGHRIAGTG TIATDGTVGP IGGIRQKMVG AAESDAEFFL APSQNCDEVV GYAPDDLDVV AVSTFEEALD ATETIAGTGS TEGLPTCEDV NSK
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