Gene Bfae_11460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_11460 
Symbol 
ID8399694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1293448 
End bp1294599 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content72% 
IMG OID644997217 
Productpredicted secreted protein containing a PDZ domain 
Protein accessionYP_003154582 
Protein GI257068327 
COG category[T] Signal transduction mechanisms 
COG ID[COG3480] Predicted secreted protein containing a PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0905061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGCACA ATGTCGGGGT GACCGCAGCA CCCACCCGAC CCTCCCGCGC CCGCCGGGTG 
CGGGCCGTCC TCGCCCGTGC CCTCGACGAC GCACAGCTGG CCCGGCCGAG GCTGGCGCTG
GGCTCCCTGC TCCTGCTGTG CGTGATGATC CTCGTCGGCT CCCTGCTGCC GGTGCCGTAC
GTCATCGAAC GGCCCGGCCC CGCGATCGAC GTGCTCGGCG ATTACCAGGA CGAGGAGATC
CTCGTCATCG ACGGGGCGCA GACCCACGAG ACGGACGGCG CGCTGATGAT GACGACGGTG
TCGGTCGACG GCGGCCCCGG CTACCGGGTG ACCCCGGTCG AGGTGGTCGC CGCCTGGTTC
GACCGCACGA AGATGGTGCT GCCGCGCGAG GCGGTCTTCC CCGAGGGCCA GACCCGCGAG
GAGACCACCC TCACCAACAC CGCAGCGATG AGCACCTCCC AGCAGGGGGC GGTCGCCGTC
GCGCTGGACG AGCTGGGGAT CGACCACGAG CAGGTGGTCA TGATCGCGGG CGTCGAGGAG
GGCGGCGCGG CCGAGGGCAC CCTCGAGGGC GGGGACGTGA TCGTCTCCGT CGACGGCGAG
GCGGCGAGCG GGGTCGAGGC GTACCGGGAG CTGATCCGGG CCGTGCCCGA GGGGGAGCCG
ATCCCCATGA CCGTGCGGCG CGACGGCACC GAGATCGAGC TCGAGGTCCC CACCGCGGAG
GTGGACGGCG CCTCGATGAT GGGCGTGGTG CTGGCCGAGG GCTACGAGTT CCCCATGGAC
GTCGACATCG CGGTGGGGGA CATCGGCGGC CCCAGCGCCG GCATGATCTT CTCCCTGTCC
GTCTACGACG AGCTCACCCC CGGGGCGCTG ACCGGCGGGC ACCGCATCGC CGGCACCGGC
ACCATCGCCA CCGACGGCAC CGTCGGCCCG ATCGGCGGGA TCCGCCAGAA GATGGTCGGC
GCCGCCGAGT CCGACGCCGA ATTCTTCCTG GCCCCCAGCC AGAACTGCGA CGAGGTGGTG
GGCTACGCGC CCGACGACCT CGACGTGGTC GCGGTCTCGA CCTTCGAGGA GGCGCTGGAC
GCCACCGAGA CGATCGCCGG GACCGGCAGC ACCGAAGGAC TTCCCACCTG TGAGGACGTG
AACAGCAAGT GA
 
Protein sequence
MGHNVGVTAA PTRPSRARRV RAVLARALDD AQLARPRLAL GSLLLLCVMI LVGSLLPVPY 
VIERPGPAID VLGDYQDEEI LVIDGAQTHE TDGALMMTTV SVDGGPGYRV TPVEVVAAWF
DRTKMVLPRE AVFPEGQTRE ETTLTNTAAM STSQQGAVAV ALDELGIDHE QVVMIAGVEE
GGAAEGTLEG GDVIVSVDGE AASGVEAYRE LIRAVPEGEP IPMTVRRDGT EIELEVPTAE
VDGASMMGVV LAEGYEFPMD VDIAVGDIGG PSAGMIFSLS VYDELTPGAL TGGHRIAGTG
TIATDGTVGP IGGIRQKMVG AAESDAEFFL APSQNCDEVV GYAPDDLDVV AVSTFEEALD
ATETIAGTGS TEGLPTCEDV NSK