Gene Bfae_11090 details

Gene Information

• Locus tag: Bfae_11090
• ID: 8399657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brachybacterium faecium DSM 4810
• Kingdom: Bacteria
• Replicon accession: NC_013172
• Strand: +
• Start bp: 1251601
• End bp: 1253523
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644997182
• Product: GTP-binding protein TypA/BipA
• Protein accession: YP_003154547
• Protein GI: 257068292
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0960389
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATCC AGCACCGCAC CGACCTGCGA AACGTCGCCA TCGTCGCCCA CGTCGATCAC 
GGCAAGACCA CCTTGGTCGA CGCCATGCTC ACCCAGGGCG GAGCCTTCGG CGACCGCGAC 
AAGCACGACG AGCGGGCGAT GGACTCCGGC GAGCTGGAGC GCGAGAAGGG GATCACGATC 
CTCGCCAAGA ACACGGCGAT CCGGTACACC GGGCCGTCCG CGGCGGCGAT CGGCGAGACC 
GACGGCATCA CCATCAACGT CATCGACACC CCCGGCCACG CCGACTTCGG CGGCGAGGTC 
GAGCGCGGCC TGTCGATGGT CGACGGCGTG GTGCTGCTGG TGGACTCCTC CGAGGGGCCG 
CTCCCGCAGA CCCGCTTCGT GCTGCGCAAG GCGCTCGCGG CGAAGCTTCC GGTGATCCTC 
GTGGTCAACA AGGTCGACCG GCCGGACGCC CGGATCGAGG AGGTCGTGGG CGAGGCCACC 
GACCTGCTGC TCGGGCTCGC CTCCGACCTC TCCGAGGAGA TGGACGACAT CGACCTCGAC 
GCCGTGCTCG ACGTCCCCGT CGTCTACGCC TCCGGCAAGG CCGGCCGGGC CTCCACCACG 
CAGCCGGCCG ACGGCACCCT CCCCGAGGAG GAGAACGTCG AGGCGCTGTT CAAGACCATC 
CTCGAGTCGA TCCCGGCCCC GAGCTACGAC GACGAGGTGC CGCTGCAGGC GCACGTCACC 
AACCTCGACG CCTCCCCGTT CCTGGGCCGC CTGGCGCTGC TGCGCATCAA GAACGGCGAG 
CTCAGCAAGG GGCAGCAGGT CGCCTGGTGC ACCCAGGACG GCACCGTCAA GCAGGTGAAG 
ATCACCGAGC TGCTGGAGAC GAAGGGCCTG GCGCGCGAGC CGATGACCCG CACCGCGCTG 
CCCGGCGACA TCGTCGCCGT CGCCGGGATC CCCGAGATCA TGATCGGCGA GACCCTCGCC 
GATCTCGCCG ATCCGCGCCC GCTGCCGCTC ATCGCGATCG ACGATCCGGC GATCTCGATG 
ACCATCGGCA TCAACACCTC CCCGCTGGCC GGCAAGAACG GCAAGGGCCA CAAGCTCACC 
GCCCGCCAGG TGAAGGACCG CCTGGACGCC GAGCTGGTCG GCAACGTCTC GCTCAAGGTG 
CTGCCCACCG AGCGCCCCGA CGCCTGGGAG GTGCAGGGCC GCGGCGAACT GGCCCTGTCG 
ATCCTCGTCG AGCAGATGCG CCGCGAGGGC TTCGAGCTGA CCGTCGGCAA GCCGAAGGTG 
CTCACCCGCG AGATCGACGG GAAGGTCCAC GAGCCCGTCG AGCGGATGAC CGTGGACGTG 
CCCGAGGAGT ACCTCGGCAC CGTCACCCAG CTGATGGCCT CGCGCAAGGG CCGCATGGAC 
ACCATGAGCA ACCACGGCTC CGGCTGGGTG CGCATGGAGT TCGTGGTGCC CGCCCGCGGC 
CTGATCGGCT TCCGCACCCG GTTCATGACC GAGACCCGCG GCAACGGCAT CGCCTCCTCC 
TACGCCGACG GCTTCGAGCC GTGGATGGGG GAGATCGAGT TCCGCTCCAC CGGCTCCCTG 
GTCGCCGACC GCGCGGGCAG CGTGACCCCG TTCGCGATGA TCAACCTCCA GGAGCGCGGC 
TCCTTCTTCG TCGAGCCCAC CTCCGAGGTG TACGCCGGTC AGATCGTCGG GGAGAACTCC 
CGCAACGAGG ACATGGACGT CAACATCACC AAGGAGAAGA AGCTGACGAA CATGCGCGCA 
GCCTCCTCGG ACACCTTCGA GAACCTGGTG CCGCCGCGCC GCCTGACCCT CGAGGAATCC 
CTCGAGTTCA CGGCCGAGGA CGAGTGCGTC GAGGTGACCC CCGAGGTGGT GCGCATCCGC 
AAGGTGCTGC TGGATGCGAA CGAGCGTCGC CGCGCGCAGT CCAAGGCCAA GTCCGGGAAG 
TGA 

 

Protein sequence

MTIQHRTDLR NVAIVAHVDH GKTTLVDAML TQGGAFGDRD KHDERAMDSG ELEREKGITI 
LAKNTAIRYT GPSAAAIGET DGITINVIDT PGHADFGGEV ERGLSMVDGV VLLVDSSEGP 
LPQTRFVLRK ALAAKLPVIL VVNKVDRPDA RIEEVVGEAT DLLLGLASDL SEEMDDIDLD 
AVLDVPVVYA SGKAGRASTT QPADGTLPEE ENVEALFKTI LESIPAPSYD DEVPLQAHVT 
NLDASPFLGR LALLRIKNGE LSKGQQVAWC TQDGTVKQVK ITELLETKGL AREPMTRTAL 
PGDIVAVAGI PEIMIGETLA DLADPRPLPL IAIDDPAISM TIGINTSPLA GKNGKGHKLT 
ARQVKDRLDA ELVGNVSLKV LPTERPDAWE VQGRGELALS ILVEQMRREG FELTVGKPKV 
LTREIDGKVH EPVERMTVDV PEEYLGTVTQ LMASRKGRMD TMSNHGSGWV RMEFVVPARG 
LIGFRTRFMT ETRGNGIASS YADGFEPWMG EIEFRSTGSL VADRAGSVTP FAMINLQERG 
SFFVEPTSEV YAGQIVGENS RNEDMDVNIT KEKKLTNMRA ASSDTFENLV PPRRLTLEES 
LEFTAEDECV EVTPEVVRIR KVLLDANERR RAQSKAKSGK