| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_10680 |
|---|
| Symbol | |
|---|
| ID | 8399616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 1200099 |
|---|
| End bp | 1201046 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644997141 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003154506 |
|---|
| Protein GI | 257068251 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00411516 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCAGCT CCGGCGGCGC GAGGCGCACC GGCGGCTCAG GGTCCGCGGG GGCGCGGGGC
GGGGGCACGG GAGCGGGGAT CTCCTACAGT GGGGCGATGT CCCGCCGCGA CCGCTCGCGC
CGCGCTGCCT TCGTGCACCT CGGCCCGCTC GACACCTCGA TCCCCCTCTC CACCGGGAGC
GCCCGGTTGA CCCTGGAGAA CGACGGGTCG GTGCTGCTGG ACGTGAACGG GGTCCCCTCC
TCGCACCTCC ACCCGGATCC CGAGCACCTG GTGTTCGAGT ACATGCGCTG GATGCTGCTG
GTGATCGATC GCCACCTCGA CGCGGCCGAT GCGGTCGGGC GGGACGGTTC CCCTCCCGTC
CCGCAGCTCG CCCATCTCGG CGGCGGCGGC TGCTCCCTGC CGCGGGCCGT CACGGCCCGG
CACCCCCGCT CACGGCAGGT CGTGGTCGAG ATCGACGCGC TGCTGGCCGA GAAGGTGCGG
GAGTGGTTCG ATCTCCCCCG CTCGCCGCAG CTGCGGCTGC GCGTCGACGA CGCGCTCAGC
GCGCTCGGGT CCTGGCGCGA CGACCGTTTC GACGTCCTGG TGCGCGACGT CTTCAGCGGG
TCGGTGACCC CGGAGGAGCT CACCACGGTC CAGGCCGCCT CCCACGCCGA TCGCGTTCTG
CGCGAGGGCG GGCTCTATCT GGCCAACTGC GCGGCACCTC CGGGCACCGG GATGATGGCG
GACGAGGTCG CGACCCTCTC TGCGGTGTTC CCGCACGTCG GCGTCATCGC CGAACCGGCG
CACCTCTCGG GCAAGCGTCG CGGGAACTGC GTGCTGCTCG CCTCGCGCCG GCCGCTGCCC
GAGGGCATCG ACCGGGACCT GCGCTCGGAT GCGGTCTCCG TACGCCTGGC GCGGCCCGCC
CAGGTCGAGG CGCTCGCACG GGCCGGGCGC GTCCTCGAGG CGCGCTGA
|
|---|
| Protein sequence | MLSSGGARRT GGSGSAGARG GGTGAGISYS GAMSRRDRSR RAAFVHLGPL DTSIPLSTGS
ARLTLENDGS VLLDVNGVPS SHLHPDPEHL VFEYMRWMLL VIDRHLDAAD AVGRDGSPPV
PQLAHLGGGG CSLPRAVTAR HPRSRQVVVE IDALLAEKVR EWFDLPRSPQ LRLRVDDALS
ALGSWRDDRF DVLVRDVFSG SVTPEELTTV QAASHADRVL REGGLYLANC AAPPGTGMMA
DEVATLSAVF PHVGVIAEPA HLSGKRRGNC VLLASRRPLP EGIDRDLRSD AVSVRLARPA
QVEALARAGR VLEAR
|
|---|
| |