| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_10460 |
|---|
| Symbol | |
|---|
| ID | 8399594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 1175316 |
|---|
| End bp | 1176224 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644997119 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_003154484 |
|---|
| Protein GI | 257068229 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.184566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA CCGCCCCGCG CCCCGCGCGG CCGTTCGGCG CGGTGGGGAC CGCGATGGTC
ACCCCGCTCA CCGAGGACGG CCACGGAGTG GACCTCGATG CCGCCCAGAG GCTGGCCGAC
CACGTGGTCC GGCACGGCAA CGACATGATC GTCGTCTCCG GCACCACCGG TGAGGCACCC
ACCCTCACCG ACGTGGAGAA GCTCGAGCTC GCACGCGCCG TCAAGAGCGC CGTCGACCCC
GAGATCACCG TCGTCGCGGG TGTGGGCACC TACGACACCG CCCATTCGAT CGACCTCGCG
CGCGAGCACG CGAAGCTCGG CGTCGACGGG CTGCTGGTCG TCACGCCGTA CTACTCCAAG
CCGAGCCAGG CCGGGATCAT CGCGCACACC ACCGCGATCG CCGACTCCAC CGATCTGCCG
GTCATGCTCT ACGACATCCC CGGCCGCACC GGCACGCCGC TGAGCACCGC GACCCTGCTG
CGCCTGGGGG AGAACCCGCG GATCCGTGCG GTGAAGGATG CCAAAGCAGA TCTGCACCAG
GCCAGCATGG TGATGGCCCA GACCGACCTC GTGTACTACT CGGGCGAGGA CGGCCTGAAC
CTCCCGTGGC TGTCCATCGG CGCTTCCGGG CTCGTCTCCG TGGTGGGACA GGTGGCTGGC
GACCTCGAGC GGGAGCTGGT CGAGGCGGTC GACCGCTCCG ATCTCGCCGC CGCCCGCGAC
GCCCATCAGC GCCTGGTCCC GGTGACCGAG GCGATCATGA ACCACATGCC CGGCGCTGTG
GCGGCCAAGG CCGCGCTGCA CCTGCAGGGG GTGCTGCCCC ACGCCGTGAT GCGCGGTCCC
CACGTCCCCG CCGACACCGA CCAGCTGCGC ATGCTCCAGG CCGCGCTGGA CGCCGCCGGC
CTCGCCTGA
|
|---|
| Protein sequence | MTSTAPRPAR PFGAVGTAMV TPLTEDGHGV DLDAAQRLAD HVVRHGNDMI VVSGTTGEAP
TLTDVEKLEL ARAVKSAVDP EITVVAGVGT YDTAHSIDLA REHAKLGVDG LLVVTPYYSK
PSQAGIIAHT TAIADSTDLP VMLYDIPGRT GTPLSTATLL RLGENPRIRA VKDAKADLHQ
ASMVMAQTDL VYYSGEDGLN LPWLSIGASG LVSVVGQVAG DLERELVEAV DRSDLAAARD
AHQRLVPVTE AIMNHMPGAV AAKAALHLQG VLPHAVMRGP HVPADTDQLR MLQAALDAAG
LA
|
|---|
| |