| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_10450 |
|---|
| Symbol | |
|---|
| ID | 8399593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 1172443 |
|---|
| End bp | 1175259 |
|---|
| Gene Length | 2817 bp |
|---|
| Protein Length | 938 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644997118 |
|---|
| Product | asparagine synthase, glutamine-hydrolyzing |
|---|
| Protein accession | YP_003154483 |
|---|
| Protein GI | 257068228 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00957139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAA TCGCCGGCAC CTACGGATTC GGTGCTGACA CCGAGGACAT CGCCCGCAGG
ATGAGCGGCG CTCTGGCGCA CCGCGGACCC GACGGCGAGG GCCTCTTCGT CGACGACCGG
ACGGGGCTGG CCCACCGCCG CCTCGCGATC ATCGACCGTG AGCACGGTGC GCAGCCGATG
ACCACGGCCG ACGGCCGCTA CACGATCATC TACAACGGCG AGACCTACAA CTACCTCGAC
CTGCGCGCCG AGCTCGAGGA GCTCGGCCGC ACCTTCCGCA CCGACTCCGA CACCGAGGTG
CTGCTCCAGG CGCACGCGGA GTGGGGCACC GCCGCGTACG ACCGCTTCAA CGGCATGTTC
GCCTTCGCGA TCCATGACGC GCACACCGGC ACGGTGACCG TCGCCCGCGA CCACTTCGGC
ATCAAGCCGC TCTACTACTG GATCGACCCC GCCACGACCG AGGCCCCGGG GGAGGGGCCG
CGCGTCCTGT TCGGCTCCGA GATCCGCTCG CTGCTGGCCG CGAACGCCTT CGAGGCCGCG
CCGGACGACC GCGCCGTCTA CCGCTACCTG AAGTTCCGCG TCCAGGACGA CGACTCGCAG
ACCTTTTTCG CCGGGGTGCG GCGACTGATG GCCGGCGAGG TGCTCGAGAT CCGCGCCGAC
GGCACGGAGA TCTCCTCCTT CACCCGGCTG AAGGACGAGC TGCGCGAGAT CGCCGCCCGC
CCCGGCCGCC CCTACGACCA GTCCGTGGTC GACGAGTACC GCGAGCGCTT CCAGGAGTCC
GTGCGGCTGC GCCTGCAGTC CGAGGTCCCC GTGGGCACCT CGCTCTCCGG CGGTCTGGAC
TCCTCCGCGG TCGCCGCCGT GATCGCGCGG CAGCTGCGCG AGCAGCCCGA GGACGAGCGG
TACAGCGCCG TCGGCACCCG GCAGAACACC TTCTCGGCCG TCTTCCCGAA CTCCTCGAAC
GACGAGGAGC GCTACGTCGA CGCGCTGCTG GACGACTACC GCGGGCAGAT CACCTCCCAC
AAGATCCAGC CTCAGCCGGA CGCCTTCCTC GAGGACGTGC ACGACTTCGT GCGCACCCAG
GAGGAGCCGA TCATCTCCAC CGGTCCGTAC GCCCAGTACG CGGTGATGCG CGAGGCCAGC
CAGCACGTCA CCGTACTGCT GGACGGCCAG GGCGCGGACG AGATGATGGC CGGGTACAAC
CCGTACTTCT ACGTCTACCT GCGCCAGCTG CGCCGGCAGA AGCGGTTCAA GGAGCTCGCG
AGCGAGATCG TCGGCTCCCG CGACATCCTG CGCAAGCTGG CGCGCACCAA GTTCTCCGGC
CGCACCTCGG TGCCGATCGA GGCGCTGCTG AACTCCGGCT TCGTCGCCGA GCACAGCGGT
GAGAAGGTCA CCTCGGTCCA GGACGACATC AAGGAGCGCC TGCTCGAGGA CACCTTCCGC
TCGTCCCTGC CCTCGCTGCT GCGCTACGAG GACAAGAACA CGATGCGCTT CAGCATCGAG
GGCCGGGTGC CCTTCGTCGA CAAGGAGCTG CTGAAGTTCC TGTTCTCCCT CGACGAATCC
GCGATCATCC ACGACGGCTG GAACAAGCGG ATCCTGCGCG AGTCGATGGA CGGGATCCTT
CCCGACATGA TCTCCAAGCG GCGCAACAAG ATCGGCTTCA CCACCCCGGA GGGGGAGTGG
TTCCGCTCGA TCGCCCCGCA GCTGCGGGAG GTCTTCGCCT CCGCCTCCTT CGCCTCGCGC
CCCTACTTCG ACGCCCCGAG CGTGCTGGCG CTGTTCGACG ACTACATCGC CCACCCCGAG
AACCACGGCA CCCTGATGTT CTGGCGGCTG CTGAACGTCG AGCTGTGGAT GCGCACGTTC
TTCGATGACG CCGACGGCGC CGCCCGCGCG CTCGGCGGCT CCGCCGACAC CGACGCTGCC
GCGGCGCCCG AGACGGTGCC GAGGGACTCC GCGACCGCCC CGTCGGGAGA GAGCGCCGGC
CACACCGCCG CAGCGGCCGC CGGGGCCGCG GCGGCGACGC AGGAGGAGCC GCCCAAGAGC
GACTACGTCG CCAACCCCGA CAAGCAGCTC GACCTGGTCT CCGAGGCCGA CGGCCACAGC
TGGCGCCGCC TGCCGCTGCA GACCTCCCTG GTGGCCCGCG GAGACGACAT CGAGGCGCTG
GTGCGAGGCC ATGTCGAGCG CTTCGCCGCG GGTCTCCCGG CCGATGCGGT CCCCGAGCAG
GCCCCCTGGT ACTTCGTGAT CAGCGAGAAG ATCGTCGCGA TCGCGCAGGG CCGCTCCTGG
TTCACCTGGG AGGTCAAGCC CCGCCGCGCC GCGAAGGTGC TCAGCCGCTT CGTCAGCCGC
ACCCCGGCGG GCATCGGGCT GGGCGACCCC ACCACCATGG AGCTCGCCAT CCGCGAGGTC
GGGCTGCCGC GCGTGCTCGC GGCCTCCGCC GCGGGCGCCG CCGGCAAGGC GGTGGGTCGC
AAGGGACTGT TCTACGAGGT CGTCGGTGCC GATGTGCGCG CGATCGACGG CCCCACCCCG
TACTCGGCCT TCCCCTCGAA CGTCTCCGCC AAGCTGCCGC CGAAGGATCC GGACGCCGTC
TCCGCCCTGA TCTCCGCCGC GATCCGCGCG GCCGACATCC CGGCCTGGCT GCGCGACAGC
TTCGTGGGCA CCGTGGTGAT GGACGCCAAC GACATCGGGC GCAACGTCCT GGGCTCCGAT
GTCGCGACCC CGCACCCGCA CCTCGAGGCG ACCTTCGCGG ACAACCCCCT CGGCCAGGGC
CGCCAGCGCA CCCCGCTGGC GATCCTCGTC GACCTCGGCA CCGCGTCACA GCGCTGA
|
|---|
| Protein sequence | MCGIAGTYGF GADTEDIARR MSGALAHRGP DGEGLFVDDR TGLAHRRLAI IDREHGAQPM
TTADGRYTII YNGETYNYLD LRAELEELGR TFRTDSDTEV LLQAHAEWGT AAYDRFNGMF
AFAIHDAHTG TVTVARDHFG IKPLYYWIDP ATTEAPGEGP RVLFGSEIRS LLAANAFEAA
PDDRAVYRYL KFRVQDDDSQ TFFAGVRRLM AGEVLEIRAD GTEISSFTRL KDELREIAAR
PGRPYDQSVV DEYRERFQES VRLRLQSEVP VGTSLSGGLD SSAVAAVIAR QLREQPEDER
YSAVGTRQNT FSAVFPNSSN DEERYVDALL DDYRGQITSH KIQPQPDAFL EDVHDFVRTQ
EEPIISTGPY AQYAVMREAS QHVTVLLDGQ GADEMMAGYN PYFYVYLRQL RRQKRFKELA
SEIVGSRDIL RKLARTKFSG RTSVPIEALL NSGFVAEHSG EKVTSVQDDI KERLLEDTFR
SSLPSLLRYE DKNTMRFSIE GRVPFVDKEL LKFLFSLDES AIIHDGWNKR ILRESMDGIL
PDMISKRRNK IGFTTPEGEW FRSIAPQLRE VFASASFASR PYFDAPSVLA LFDDYIAHPE
NHGTLMFWRL LNVELWMRTF FDDADGAARA LGGSADTDAA AAPETVPRDS ATAPSGESAG
HTAAAAAGAA AATQEEPPKS DYVANPDKQL DLVSEADGHS WRRLPLQTSL VARGDDIEAL
VRGHVERFAA GLPADAVPEQ APWYFVISEK IVAIAQGRSW FTWEVKPRRA AKVLSRFVSR
TPAGIGLGDP TTMELAIREV GLPRVLAASA AGAAGKAVGR KGLFYEVVGA DVRAIDGPTP
YSAFPSNVSA KLPPKDPDAV SALISAAIRA ADIPAWLRDS FVGTVVMDAN DIGRNVLGSD
VATPHPHLEA TFADNPLGQG RQRTPLAILV DLGTASQR
|
|---|
| |