Gene Bfae_10220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_10220 
SymbolispG 
ID8399570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp1146727 
End bp1147887 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content69% 
IMG OID644997095 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_003154460 
Protein GI257068205 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTCTG TGAGCCTCGG TATCCCCTCC GTCAAGCAGC CACCGCCGGT GCTCGCCCCC 
CGGCGGAAGA CCCGCAAGGT CAAGCTCGGC GACCTCTACG TGGGCGGCGA CGCACCGATC 
ACGGTGCAGT CGATGACCAC CACCCCCACG CACGACATCA ACGCGACCCT GCAGCAGATC 
GCGGAGCTGA CCACGGCGGG CTGCGACATC GTGCGCGTGG CCTGCCCCCG GCAGGAGGAC 
GCCGACGCGC TGGTCGCGAT CGCCGCGAAG TCCCCGATTC CGGTGATCGC CGACATCCAC 
TTCCAGCCCA AGTACGTCTT CGCCGCGATC GAGGCCGGCT GCGCGGGGGT CCGCGTGAAC 
CCCGGCAACA TCCGCCGCTT CGACGACCAG GTCAAGGACA TCGCCAAGGC CGCGAACGAC 
CACGGCACCG CTCTGCGCAT CGGCGTGAAC GCCGGCAGCA TCGACAAGCG CATGATGACC 
GGCGACCGCG TCACCCCGGA GGCCCTGGTC GCCTCCGCGA AGTGGGAGGC CTCCCTCTTC 
GAGGAGCACG GCTTCCACGA CTTCGGCATC TCCGTGAAGC ACAACGACCC GATCATCATG 
GTCGAGGCGT ACCGCCAGCT CTCCGAGGCG GGGGACTGGC CGCTGCACCT GGGCGTCACC 
GAGGCAGGGC CCGCCTTCCA GGGCACCATC AAGTCCTCCA TCGCCTTCGG CATCCTGCTG 
GGCGAGGGCA TCGGCGACAC GATCCGCGTC TCGCTCTCGG CCCCGCCGGT CGAGGAGGTC 
AAGGTCGGCA ACCAGATCCT GCAGTCGCTG AACCTCAAGC CGCGCAAGCT GGACATCGTC 
TCGTGCCCCT CCTGCGGCCG TGCCCAGGTG GACGTCTACA CCCTCGCCGA CAAGGTCACC 
GAGGGGCTCA AGCACCTCGA GGTGCCGCTG CGCGTGGCCG TGATGGGCTG CGTCGTCAAC 
GGTCCGGGCG AGGCCCGCGA AGCGGATCTC GGCGTGGCCT CCGGCAACGG CAAGGGCCAG 
ATCTTCGTCA AGGGCGAGGT CATCAAGACC GTCCCGGAGG AGGACATCGT CGAGACCCTG 
CTGGCCGAGG CCAACCGGAT CGCGGCCGAG ATGGGCGAGG ACGCGTCCGC CGGCAGCGCC 
CCGTCGGTCT CCGTGGGCTG A
 
Protein sequence
MTSVSLGIPS VKQPPPVLAP RRKTRKVKLG DLYVGGDAPI TVQSMTTTPT HDINATLQQI 
AELTTAGCDI VRVACPRQED ADALVAIAAK SPIPVIADIH FQPKYVFAAI EAGCAGVRVN 
PGNIRRFDDQ VKDIAKAAND HGTALRIGVN AGSIDKRMMT GDRVTPEALV ASAKWEASLF 
EEHGFHDFGI SVKHNDPIIM VEAYRQLSEA GDWPLHLGVT EAGPAFQGTI KSSIAFGILL 
GEGIGDTIRV SLSAPPVEEV KVGNQILQSL NLKPRKLDIV SCPSCGRAQV DVYTLADKVT 
EGLKHLEVPL RVAVMGCVVN GPGEAREADL GVASGNGKGQ IFVKGEVIKT VPEEDIVETL 
LAEANRIAAE MGEDASAGSA PSVSVG