Gene Bfae_09950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_09950 
Symbol 
ID8399543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1122621 
End bp1124213 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content70% 
IMG OID644997068 
Productsignal recognition particle subunit FFH/SRP54 (srp54) 
Protein accessionYP_003154433 
Protein GI257068178 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0229355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCAACA ACCTCTCCGA TCGCATCACA GCGTCGCTGA AGGGCCTGCG CGGCCACGGC 
CGCCTCACCG AGGCGGACGT CGACAAGACG ATCCGCGAGA TCCGCCGTGC CCTGCTCGAC
GCCGACGTCG CCGTCGCCGT GGTGCGGGAG TTCACCGGGC GGGTCCGCGA GCGCGCCCTG
GGCGAGGAGG TTTCCAAGGC CCTCAACCCC GCCCAGCAGG TCGTCAAGAT CGTCAACGAC
GAGCTGGTCG AGGTGCTCGG CGGCGCCACC GGCGAGCTGC ACTTCGCGAA GAACCCGCCC
ACCGTCATCA TGCTGGCCGG CCTCCAGGGC GCGGGCAAGA CCACCCTGGC CGGCAAGCTC
GCGAAGTGGA TGAAGGCCGA GGGGCACACC CCGCTCCTGG TCGCCGCGGA CCTGCAGCGC
CCCAACGCCG TGACCCAGCT GCAGGTGGTC GGCGAGCGTG CCGGCGTGCC GGTGTTCGCG
CCGGAGCCGG GCAACGGCGT GGGCGACCCG GTGCTGGTGG CGATGAACGG CGTCTCGACC
GCCCAGTTCC AGCAGCATGA CGTGGTCATC GTCGACACCG CGGGCCGTCT CGGCATCGAC
GAGGAGATGA TGGAGCAGGC GCGGAACATC CGCGACGCCG TCACCCCGCA CGAGACCCTG
TTCGTCGTCG ACGCGATGAT CGGCCAGGAC GCCGCCCGCG TCGCCGAGGC CTTCCGCGAC
GGCGTGGGCT TCACCGGCGT GGTGCTCTCG AAGCTCGACG GCGACGCCCG CGGCGGTGCC
GCGCTGTCGA TCACCGGCGT CACCCAGCGC CCGATCCTCT TCGCCTCCAC CGGTGAGAGC
CTCGACGAGT TCGAGCGCTT CCACCCGGAC CGCATGGCCA ACCGCATCCT CGACATGGGT
GACGTGCTCA CCCTCATCGA GCAGGCGGAG AAGGCCTTCG ACCAGGAGGA GGCGGAGAAG
GCCGCCGCGA AGCTGGCCTC CGGCGAGGAC TTCACCCTCG ACGACTTCCT CAACCAGATG
CAGCAGCTCA AGAACATGGG CAGCATCAAG AAGATGCTCG GCATGCTGCC GAACATGGGC
CAGTACCGCG AAGCGCTGGA CAACTTCGAC GAGGGCGAGA TCGGCAGGAT CGAGGCGATC
ATCCGCTCGA TGACGCCCGA GGAGCGCAAC AACCCCAAGA TCATCAACGG CTCGCGCCGC
AACCGCATCG CCCGCGGCTC CGGCACCACC GTGCAGCAGA TCAACCAGCT GCTCGAGCGG
TTCAAGCAGG CCCAGCAGAT GATGAAGACG ATGGGGCGCG GCATGGCCGG CGGCGGCATG
CCGGGCATGC CCGGCGGCCC CGGCATGGGG ATGGGCAAGA AGTCCCGCGG CAGGCAGGCC
CCGCAGAAGA AGGTCAAGAA GTCCAAGTCG AAGAACCCCG CGAAGGCCGC ACGCGAGCAG
GCCGAGGCCG CTCGCCGCGC CGCCGAGGGC GGTGCCGGCA CGGGCGGTTC CGCGTTCGGC
GCGGGCGCCT CGCAGGGCGG CCAGCCGGAC GTGTCCGACT TCGATCCCAG CCAGCTCCCG
CCGGAGATGC AGAAGCTCCT CGGCGGCAAG TGA
 
Protein sequence
MFNNLSDRIT ASLKGLRGHG RLTEADVDKT IREIRRALLD ADVAVAVVRE FTGRVRERAL 
GEEVSKALNP AQQVVKIVND ELVEVLGGAT GELHFAKNPP TVIMLAGLQG AGKTTLAGKL
AKWMKAEGHT PLLVAADLQR PNAVTQLQVV GERAGVPVFA PEPGNGVGDP VLVAMNGVST
AQFQQHDVVI VDTAGRLGID EEMMEQARNI RDAVTPHETL FVVDAMIGQD AARVAEAFRD
GVGFTGVVLS KLDGDARGGA ALSITGVTQR PILFASTGES LDEFERFHPD RMANRILDMG
DVLTLIEQAE KAFDQEEAEK AAAKLASGED FTLDDFLNQM QQLKNMGSIK KMLGMLPNMG
QYREALDNFD EGEIGRIEAI IRSMTPEERN NPKIINGSRR NRIARGSGTT VQQINQLLER
FKQAQQMMKT MGRGMAGGGM PGMPGGPGMG MGKKSRGRQA PQKKVKKSKS KNPAKAAREQ
AEAARRAAEG GAGTGGSAFG AGASQGGQPD VSDFDPSQLP PEMQKLLGGK