| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_09210 |
|---|
| Symbol | |
|---|
| ID | 8399469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 1046213 |
|---|
| End bp | 1047526 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644996996 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_003154364 |
|---|
| Protein GI | 257068109 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR02079] threonine dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATG CCATGGAACT GCCGGTGCGC GCCCCGGAGG TCGAGGCAGC GGCCGAGCGG
CTCGCCCCGG TGCTGCGGCG CACCCCGCTC CAGCACAGCG AGCGCCTCAG CGAGCTGGCC
GGCGCCCCGG TGTGGCTCAA GCGCGAGGAT CTGCAGTCGG TGCGCTCCTA CAAGCTCCGC
GGGGCGCATC TCTTCCTCGA CTCCCTGTCG CAGGCGGCGC GGGAGGCGGG CGTGGTGGCG
GCGAGCGCCG GCAACCATGC CCAGGGCGTC GCCCAGGCCT GCCGCACCCT CGGCATCCAG
GGGCGCATCT ATGTGCCCGG CACCACGCCC CGGCAGAAGC GCGAGCGGAT CACCGCGATC
GGCGGGGACC TGGTCGAGCT GGTGCTGATC GGCGACACCT TCGACGACGC CGCTGAGGCC
GCGGCCGACG ATGCCGACCG CACCGGTGCC ACGCAGGTGC CGCCCTTCGA CCATCCGGTG
ATCATGGCCG GGCAGGGCAC CGTGGCGCTC GAGGCGGCGG AGCAGCTGCG CAGCGAGCAC
GGCCGGGAGC TGGGCACGAT GGTGGTGCCG GTGGGCGGCG GCGGGCTGCT CGGCGGCTGC
GGGGCGTGGC TGCGGGAGCG CAGCCCGGCG ACCCGGATCA TCGGCGTGGA GCCCGCGGGC
GCGGTCTCGA TGTCCGCCGC GGTGCGGGCC GGGCGCCCGG TCACGCTCCA CGAGATGGAT
CGCTTCGTCG ACGGTGCCGC GGTGCGCCGT GTCGGGGCCG CTCCGCTGCG GATGGTGAAG
GCGATCGCGC CCGAGCTCGT CGCCGTGGAC GAGGGTGCCG TGTGCACCCA GATGCTCGAC
CTCTACCAGG TCGAGGGCAT CATCGCGGAG CCCGCGGGCG CGCTCGCGGC GACCGCCGTG
GCCGCCGGGA CGATCGAGCA CCTGGGCCGT GCGGGCGCCG ACGCCCCGGA TCCCGAGGAG
GAGACCGGGG ACATCGTCGT GGTGGTCTCC GGAGGCAACA ACGACGTCTC GCGGTACAAC
GAGATCGTGG AGCGGTCCCT CGTGCACGAG GGGCTCAAGC ACTACTTCCT GGTGACCTTC
CCCCAGGAGC CGGGGGCGCT GCGCCGCTTC CTGGACCGGG TGCTGGGGCC GAACGACGAC
ATCGTGCTGT TCGACTACAT CAAGCGCAAC AACCGCGAGG AGGGCCCCGC CCTGGTGGGG
CTCGAGATCG GCGACCGCGA GGACCTCGAA CCGCTGATGG CGCGCATGGC CGCCTCGAAC
ATGGAGATCG AGCGGGTCGA TCCCGAGAAC CCGATCTACC GCTACCTCAC CTGA
|
|---|
| Protein sequence | MTDAMELPVR APEVEAAAER LAPVLRRTPL QHSERLSELA GAPVWLKRED LQSVRSYKLR
GAHLFLDSLS QAAREAGVVA ASAGNHAQGV AQACRTLGIQ GRIYVPGTTP RQKRERITAI
GGDLVELVLI GDTFDDAAEA AADDADRTGA TQVPPFDHPV IMAGQGTVAL EAAEQLRSEH
GRELGTMVVP VGGGGLLGGC GAWLRERSPA TRIIGVEPAG AVSMSAAVRA GRPVTLHEMD
RFVDGAAVRR VGAAPLRMVK AIAPELVAVD EGAVCTQMLD LYQVEGIIAE PAGALAATAV
AAGTIEHLGR AGADAPDPEE ETGDIVVVVS GGNNDVSRYN EIVERSLVHE GLKHYFLVTF
PQEPGALRRF LDRVLGPNDD IVLFDYIKRN NREEGPALVG LEIGDREDLE PLMARMAASN
MEIERVDPEN PIYRYLT
|
|---|
| |