| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_08460 |
|---|
| Symbol | |
|---|
| ID | 8399394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 964690 |
|---|
| End bp | 966429 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644996922 |
|---|
| Product | ABC-type dipeptide transport system, periplasmic component |
|---|
| Protein accession | YP_003154290 |
|---|
| Protein GI | 257068035 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCA GCACCAATCG CCGCCGCTTC CTCCAGGGGA CGGCCCTCCT CGGCGGAGCG
GGTGCTCTCG CCGCCTGCGG ACAGAAGTCG TCCGAGGAGC AGGCCGACGA GGCCGCCGAG
GAGAACAAGA AGAAGGCGGA CGAAGCGTCT GAGCTGCCGT CGACCGCGTG GACGCGTGCC
GAGTACGACG ATGTCGAGGA GGGCGGGACC CTCCGCCTGG CCGTGTCCCA GCTGCCGAAC
AACTGGAACG GCAGCCACGC GGACGGTGCT CTCGTGGACC GCAGCACGAT CGTCGATTCG
ATGAGCGCCT CCGGCATCCG CTTCACCGAG GAAGGCGAGT GGGAGCTCGA CCCGGACTAC
GTCGTCTCGG CCGAGGTCAC GAGCGAGGAT CCTCAGATCG TGACGGTGAA GTACAACCCG
GATGCGGTGT GGGAGACGGG CGATCCGATC ACCATCGAGG ACCTGATCGC CTATTCGAAG
GCGCTCAAGG GGGACGACGA CGCCTTCCAG GTCGCGAGCA CCGTGGGCTG GGAACAGGTG
AAGGAGGTCC GCCAGACCGA CGACGAGTTC ACCGGCGAGA TCGAGTTCGA CTCCCCGTAT
GCGGACTGGA TCACCCTCAT CTACCCCGAG TTCCCCCACG GGATCTCCGA CGACCCCGAG
GAGTTCAACA AGGGGTACGT CGACGAGAAC ACCCCGAGCA ACGGCCCCTT CAGGGTGGAG
AGCATCGACA ACTCCGCCGG CGTCGTCACC CTCACGCAGA ACGACAAGTG GTGGGGCCGC
GCACCGAAGC TCGAGAAGAT CATCTTCTCG GTGGTCAGCC AGCAGCAGCT GCCCTCGGCA
TTCGCGAACG GGGAGCTCGA TGCGCTCGAC GGCATCGCCG ACGGCGACAC CTACTCCCAG
GCGGCAGCTC GGGACGACGT CGAGATCCAG AAGTCCAACG GTGTGACCTG GAACTGGCTC
GGGATCAACC TCGAGGGCGG CAAGGGCATC CTCGCGGACG AGAAGGTCCG TGAGGCGATC
GCCCGCGGCA CCAACCGTGA GGCCGTGGGC GAGGCCGTGG TGGGCCCGCT GGACTCCCCG
GTGATCCTCA AGGACCACTT CGTGTTCATG CCCGGTCAGG AGGGCTACGA GGACTCCTAC
GAGGCCGCGT TCGGGGATCC GCTCACCTTC GATCCCGAAC GGGCCGAGCA GATCCTCGAT
GATGCCGGCT GGGAGCTCGG CGACGGAGGC GTCCGCACGA AGGACGGCGA CAAGCTCGCT
CTGTCCTTCC TCATCCCGGC GGATGTGAAG TCCAACTCCG ACCGTGCGCG TCAGATCCAG
TCGGATCTCA ACGAGATCGG CTTCGAGGTC GAGCTGCAGA CCGTCCCCGC GGATGCCTAC
TTCGACGAGT ACATCCACGT GGGCAACTTC GATCTCATCA CGCCGGGCTG GCAGGGGACC
AACTTCCCCG AGACGTCGTC GTCGAACATC TACTACCCGC ATTCCTCGGC CCAGAACTAC
ACCGGGATCA ACCTGGATGA CGAGGTCGCC GACGATGTGA ACACGATGAA GAGCGAGACG
GACGAGGCCG TGCGACTCGA GGCCACGAAC CGTTTCTCGA AGGCCGTCGC CGAGACGTTC
TCGACGATCC CGCTCTACGC GACCCCGAAA ATCTTCGCGG TCAAGGAGGG GATCGTGAAC
TACGGCGCGT CCCTCTTCGA GTCCATCGAC TGGACCCAGG TCGGCTACGC GAAGGAATGA
|
|---|
| Protein sequence | MTLSTNRRRF LQGTALLGGA GALAACGQKS SEEQADEAAE ENKKKADEAS ELPSTAWTRA
EYDDVEEGGT LRLAVSQLPN NWNGSHADGA LVDRSTIVDS MSASGIRFTE EGEWELDPDY
VVSAEVTSED PQIVTVKYNP DAVWETGDPI TIEDLIAYSK ALKGDDDAFQ VASTVGWEQV
KEVRQTDDEF TGEIEFDSPY ADWITLIYPE FPHGISDDPE EFNKGYVDEN TPSNGPFRVE
SIDNSAGVVT LTQNDKWWGR APKLEKIIFS VVSQQQLPSA FANGELDALD GIADGDTYSQ
AAARDDVEIQ KSNGVTWNWL GINLEGGKGI LADEKVREAI ARGTNREAVG EAVVGPLDSP
VILKDHFVFM PGQEGYEDSY EAAFGDPLTF DPERAEQILD DAGWELGDGG VRTKDGDKLA
LSFLIPADVK SNSDRARQIQ SDLNEIGFEV ELQTVPADAY FDEYIHVGNF DLITPGWQGT
NFPETSSSNI YYPHSSAQNY TGINLDDEVA DDVNTMKSET DEAVRLEATN RFSKAVAETF
STIPLYATPK IFAVKEGIVN YGASLFESID WTQVGYAKE
|
|---|
| |