| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_08370 |
|---|
| Symbol | |
|---|
| ID | 8399385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 954820 |
|---|
| End bp | 956463 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644996913 |
|---|
| Product | ABC-type dipeptide transport system, periplasmic component |
|---|
| Protein accession | YP_003154281 |
|---|
| Protein GI | 257068026 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.273822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCACAC ACTCCACCGG TCGGCTCGGC AGGCGCGGCT TCCTCCGCGG CACGGCAGCC
CTCGCGGGCG CCGCAGGGAT CGTCGCCGGG ATCGGCGCCT GCGCGCCCCG CGACAACGGC
TCCGCAGGCG GTGCCGGCGG TTCGGACGGC GGCGGCGAGC CCGCCGGCGA GGCGAACCCG
GACGGCCACA TCAGCGCCGC GATCAGCTAC GAGCTGGGCA CCAACGGCTA CGACCCGATG
ACCACCTCCG CCGCGCTGAC GGTCGCCGTC AACTGGCACA CCCTCGAGGG CCTCACCGAG
CTGCACCCCG TGACCCGCGA GGCCTATGCG GCGCTGGCCG CCGAGCTGCC CTCCGGCGAG
AGCGACAGCG TCGACGTCAC GCTGCGCGAG GGCGCGGTCT TCCACGACGG CTCCCCGGTG
ACCGCCGACG ACGTCGTGTT CTCCTTCGAG CGGGTCCAGG ACCCGGACAA CGCCTCGCTG
TACTCGCAGT TCATCCCCTT CATCGACTCC GTCGAGAAGA AGGACGACAC CACGGTCACC
TTCACCCTCA AGCACCCCAC CGGCGTGTTC GCCGAGCGGC TGTCCACGGT GAAGATCGTG
CCCAAGGCCG CCGTGGAGGA GGATCCGGAC GCCTTCGACT CGAACCCGGT GGGCTCCGGG
CCGTGGCGGA TGACGGACAA CTCCGCCTCC TCGAAGATCG TCGAGTTCGA GCGCCACGAG
GAGTACACCG GCCCGATGCC CGCGCAGGCC GCGACGATGA GCTGGCAGGT GATCCCGGAT
CCCTCGACCC GCACCAACGC CCTGCAGTCC CAGACGGTGC AGGCCATCGA CTCGGTCCCC
TACCTCTCGA TCGACCAGCT GGAGGCCACC GGCAGCGTCG AGTCCGTGGG CGGGTTCGGC
CTGCTGTTCG CGATGTTCAA CAACAGCGAG GACAACCCCT TCCACGATCT GAAGAACCGC
CAGGCGTTCC TCTACGCGAT CGACATGGAC AAGGTCATCG AGACGGGCCT GGCGGGGCAG
GCGGAGCCGG CCAGCTGCTT CGTGCAGAAG GAGCATCCGA ACTACAAGGA GGCCTCGACC
GTCTACTCGC TGGACGTCGA GAAGGCCAAG AGCCTCTTCG AGGAGACGGG CCTGACCTCC
TTCCGGATGC TGTGCACGGA TCACGACTGG GTCGCCCAGT GCACCCCGAT CATCCAGGAG
TCCCTGGGCG CCGCGGGCGT CGAGGTGAAG TTCGAGCAGA AGCAGTCCGC CGACGTCTAC
ACGACGATCG ACGGCAACCC CGAGGCCTAC GACGTCGTGA TCGCCCCCGG CGACCCGTCG
GTGTTCGGCA ACGACCCCGA TCTGCTGATG CGCTGGTGGT ACGGCGGCGA CGTCTGGACC
GAGGGCCGCA TGCACTGGAA GGGCCAGCCC TCCTACGACG AGGTGCAGTC CCTGCTCGAG
CAGGGCCTGG AGGCGATCGA CCCCGCCGAG CAGGAGGAGA CGTGGGGGCA GCTGTTCGAC
CTGCTCTCCG ACGAGGTGCC GCTGTACCCG CTGTTCCACC GCAATGCGCC GACCGCCTGG
GATTCCACCA CGCTCGTGGA CTTCCAGCCG ATCTCGCTGA CCGGGCTCAG CTTCGTCGAC
GTCGGCACCA CCGAGTCCGC CTGA
|
|---|
| Protein sequence | MITHSTGRLG RRGFLRGTAA LAGAAGIVAG IGACAPRDNG SAGGAGGSDG GGEPAGEANP
DGHISAAISY ELGTNGYDPM TTSAALTVAV NWHTLEGLTE LHPVTREAYA ALAAELPSGE
SDSVDVTLRE GAVFHDGSPV TADDVVFSFE RVQDPDNASL YSQFIPFIDS VEKKDDTTVT
FTLKHPTGVF AERLSTVKIV PKAAVEEDPD AFDSNPVGSG PWRMTDNSAS SKIVEFERHE
EYTGPMPAQA ATMSWQVIPD PSTRTNALQS QTVQAIDSVP YLSIDQLEAT GSVESVGGFG
LLFAMFNNSE DNPFHDLKNR QAFLYAIDMD KVIETGLAGQ AEPASCFVQK EHPNYKEAST
VYSLDVEKAK SLFEETGLTS FRMLCTDHDW VAQCTPIIQE SLGAAGVEVK FEQKQSADVY
TTIDGNPEAY DVVIAPGDPS VFGNDPDLLM RWWYGGDVWT EGRMHWKGQP SYDEVQSLLE
QGLEAIDPAE QEETWGQLFD LLSDEVPLYP LFHRNAPTAW DSTTLVDFQP ISLTGLSFVD
VGTTESA
|
|---|
| |