Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_08300 |
Symbol | |
ID | 8399378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 946984 |
End bp | 948210 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644996906 |
Product | BNR/Asp-box repeat protein |
Protein accession | YP_003154274 |
Protein GI | 257068019 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4409] Neuraminidase (sialidase) |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.195911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACCGT CCCTGACCCG CCGCGGCCTG CTCGGCACCG CCGCCGCCCT CACCGCCGCC GGCGCCGGTG CCGTCGCGGC CGCGAGCCCG GCCGCCGCCC TGCCCCCGAT CAAGGACAAC GGCCGCCGCC AGGGCAGCTA CGAGGAGCAG GTGCTCGCCG CTCCCGGCGA CTGGGGGGTG CCGAACTTCC GCATCCCCGC CCTCGCGGTC GCCCCGAACG GCGATCTGCT GGCCGCCTTC GACAAGCGCC CCGTGCACGG CGACTCCCCC GCCCCGAACT CGATCTGGCA GCGCCGCTCC CGCGACGGTG GGCGCACCTG GGAGGAGCCG ACGGTGGTGC GAGCGGGCCT CGAATCCGAG GAGCCCGGCG AGAAGCTCGG CTACTCCGAC CCCTCGTACG TGGTCGACAC CGAGACCGGC ACCCTCTTCC TGTTCTGCGT GTTCTCGAAG GACACCGGCG TGTGGGACAG CGAGTACGGC AACGATGACG CGGACCGCCG CATCCAGAGC GCGAACCTCA GCGTCAGCCA TGACTCGGGC GAGACCTGGG AGCACCGCTC CCTCACCGAG GTGGTCAAGC CGGAGGACTG CCGCGCCATG TTCGCCACCT CCGGCGCGGG CATCCAGCTG CGCTACGGGA AGCACCGGGG CCGCCTGATC CAGCAGTACG CGGGCTGGTT CCGGGGCGAG GGCGGCGAGG AGGACGTCTC CGCATACTCC GTCTACTCCG ACGACCACGG CGAGACGTGG ACCATGGGCA CCCCGGTGGG CACCGAGATG GACGAGAACA AGGTCGCCGA GCTCTCCGAC GGCACCGTGA TGCTGAACTC CCGCGAGCAC GTGCGCACGG GCCGGCGCTG GGTGGCGCTG AGCCACGACG GCGGAGAGAC CTGGGAGGAT CTGCACCGCG ATCCGCACCT CGTGGACCCG GGCAACAACG CGCACCTCAC CCGCGCCTAC CCGGAGGCCC CGCAGGGTTC CGCGAAGGCG CAGGTGCTGC TGTTCTCGCA TGCGGACCAC GAGCCGGACG ACCGCGTGAA CGGCACCGTC GAGATCTCGA CCGACGACGG CGCGACCTGG GAGCGCAAGC GCGTGTTCGC GCCCGGGCCG TGCCAGTACT CGGTGCTCAT CCCCGTGGCC CGCGACGAGT TCCTCCTCGC CTACGAGGGC GAGGACGAGA CGCTCCTGAT CGCGCGCCTG GACATGGACT GGATCCTGTC GCGATGA
|
Protein sequence | MEPSLTRRGL LGTAAALTAA GAGAVAAASP AAALPPIKDN GRRQGSYEEQ VLAAPGDWGV PNFRIPALAV APNGDLLAAF DKRPVHGDSP APNSIWQRRS RDGGRTWEEP TVVRAGLESE EPGEKLGYSD PSYVVDTETG TLFLFCVFSK DTGVWDSEYG NDDADRRIQS ANLSVSHDSG ETWEHRSLTE VVKPEDCRAM FATSGAGIQL RYGKHRGRLI QQYAGWFRGE GGEEDVSAYS VYSDDHGETW TMGTPVGTEM DENKVAELSD GTVMLNSREH VRTGRRWVAL SHDGGETWED LHRDPHLVDP GNNAHLTRAY PEAPQGSAKA QVLLFSHADH EPDDRVNGTV EISTDDGATW ERKRVFAPGP CQYSVLIPVA RDEFLLAYEG EDETLLIARL DMDWILSR
|
| |