Gene Bfae_07660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_07660 
Symbol 
ID8399314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp872205 
End bp873275 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content69% 
IMG OID644996842 
ProductTRAP-type C4-dicarboxylate transport system, periplasmic component 
Protein accessionYP_003154211 
Protein GI257067956 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.493376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCGAT CGCCGTCATC AGACCCCGAC AGGAGACGGC GACCCCGCCG TCGGGACCTG 
CTGCGGGGGA TCCCCGCGCT CGGTCTCGGC GCTGCGGCGC TCGCCGGCTG CACGCAGGCC 
GGAGCCACCA CCGACGTCGA GAACATCCTG TCGGTGTCCC TGAACCAGGC CGAGAACCAT 
CCCAGCTTCC TGGCGCTGAC GTACTTCGGC GAGCAGCTCG CCGAGGCGAC CGAGGGCCGC 
TGGGGCGCGC GCATCTACGC GAACGAGGCG CTCGGCGCCC AGCAGGAGGT CGTGCAGCTG 
GTCTCCGACG GCTCCGTCGA CATGGCCGTG ATCTCGAGCC CGCAGGTCGA GAACCTCTCG 
ATGGCGTTCC GCCCGCTGAG TCTGCCGGGC GCGTTCCAGG ACATCGACCA CCAGACGGCC 
GTGCTGAACG ACGAGTCGAT CGTCGGCGAA CTGTTCGCCT CGCTCGAACC CGAGCGCCGG 
CTGCGGGTGC TCGGCGCGTT CACGCAGGGC TCGCGCCACA TCTACACCGA TCGCGGCCCG 
ATCGAGGGGC CCGACGACCT CGCGGGCCTC AAGATCCGGG TGCAGGAATC GGACGTGTTC 
ATGGAGCTCA CCCGCGCCCT CGGCGGCTCG CCCACGCCGA TGGCCTACGG CGAGGTGTAC 
ACCGCGCTGC AGGCCGGGGT GCTCAACGGC GCCGAGAACA ACGAGGTCAG CTACGTGACC 
CAGCGGCACT ACGAGATCGC GCCGCACTTC ACCCTCACCA ACCACCTGGT GGGGCTCGAC 
TACGTGATGG CCAACGTGGA TCGCCTCGAG AACATGGACG AGACCGACCA GGAGGCCTTC 
GCCCGCTCCT TCGCCGCCAC GCAGGAGGAG TTCGTGCGGC TGTGGGCGCA GGAGACCGAT 
GTCAGCACCC AGCACATGAT CGACCACGGC GTCGAGATCC ATGATCCCGA TCCGGAGGCG 
TTCACGCCGC TGATCGAGGA GGTGGGGCGC TCGTTCCTCG CCTCCGAGGC GGACGAGGAG 
CTGTACGAGA CGGTCCGGGC CGTCGCCGAG ACGCAGGGGG GCGAGGGATG A
 
Protein sequence
MTRSPSSDPD RRRRPRRRDL LRGIPALGLG AAALAGCTQA GATTDVENIL SVSLNQAENH 
PSFLALTYFG EQLAEATEGR WGARIYANEA LGAQQEVVQL VSDGSVDMAV ISSPQVENLS 
MAFRPLSLPG AFQDIDHQTA VLNDESIVGE LFASLEPERR LRVLGAFTQG SRHIYTDRGP 
IEGPDDLAGL KIRVQESDVF MELTRALGGS PTPMAYGEVY TALQAGVLNG AENNEVSYVT 
QRHYEIAPHF TLTNHLVGLD YVMANVDRLE NMDETDQEAF ARSFAATQEE FVRLWAQETD 
VSTQHMIDHG VEIHDPDPEA FTPLIEEVGR SFLASEADEE LYETVRAVAE TQGGEG