Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_06510 |
Symbol | |
ID | 8399199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 749851 |
End bp | 751779 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644996734 |
Product | choline/carnitine/betaine transport |
Protein accession | YP_003154106 |
Protein GI | 257067851 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGAG GCATTGTGTC CGCTCCGACG GCCAAATCCC CCTCCTCCCC GACAGCTGAT CCCCCCGCAG AGGGGAACTA TTCCCTCTCG AAGCCGGTCT TCTTCTTCGC CGGCGGCATC ATCCTCATCG CGGTCCTGTT CGCGCTGATC CTCCCGGACG TGTTCAACGA CGTCATCTCG ACGCTGAACT CCACGGTGGT CGACTCCATC GGCTGGTACT ACGTCCTGAT CGTCACCGCG TTCGTCGTGT TCGGCATCGT GGTGGCCGTC AGCCGCATGG GCAGCATCAA GCTCGGCAAG GATGACGACG TCCCCGAATA CAGCGTCTTC TCCTGGTTCG CGATGCTCTT CGCGGCCGGC ATGGGCATCG GCCTGGTGTT CTGGGGTGCG GCCGAGCCGC TGACCTTCTT CGCGGACACC GCCGCCCCCG GCATCCCGCC GAACGCGGCC GACATGGACG ACCCGACGCG CGCCGAGCGC GCGCTGGGGC AGACCTTCCT CCACTGGGGC CTGCACGCCT GGGGCATCTA CGTGGTGGTG GGCCTCGCCG TCGCCTACGC TGTGCACCGC AAGGGCCGCC CGGTCTCGAT CCGCTGGGCC CTCGAGCCGG TCCTCGGCAA GCGCACGGAC ACCTGGATCG GTGACCTCAT CGACATCATC GCGCTGGTGG GCACGCTCTT CGGCATCGCC ACCTCGCTCG GCTTCGGCGT GAACCAGATC GCCGCCGGCC TGGATCATCT CGGCGTGCTG CCGAACTCCA CGATCGTCCA GGTCATCATC GTCATCGTGG TGACGGCGCT GGCGACCCTC TCGGCCGCGA GCGGCGTCGA CAAGGGCATC AAGTTCCTCT CGAACCTCAA CATGGGCCTG GCGGCGCTGC TGCTGGTCAC CGTCCTGATC CTGGGCCCGA CGCTCTTCCT GCTGCGCGAC GTGGTCTCCA ACATCGGCTT CTACCTGCAG AATTTCCTGC AGCTCGCGTT CCAGACCCTG CCGTTCCGCG GCGAGGACGG CGGCAAGTGG CTGGGCAGCT GGACCACGTT CTACTGGGGA TGGTGGATCT CCTGGTCGCC CTTCGTGGGC GTGTTCATCG CCCGCATCTC CAAGGGCCGC ACGGTCCGCG AGTTCATCAC CGGCGTACTG CTGGTGCCGA CCTCGCTGAC CTTCCTGTGG TTCACCATCA TGGGCGGCAC CGCGCTGTAC GAGTCGGTGC TCAACGGGGT CGACTTCACC GACGCCGCGG GCGCGATCGA TCCGAACACG GCGCTGTTCG ACACCTTCGC CCAGCTGCCT GCGGGCGCGC TGCTCTCCGG CATCGCGGTC GTGCTGGTCT CGATCTTCTT CATCACCAGC GCCGACTCCG GCGCCTTCGT GATGGACATG ATCGCGCACA AGGGCGATCC GAACCCGCCG AAGATCACCC GCATCTTCTG GGCCTCGACC TCCGGCCTGA TCGCCGCGTC GCTGATCTGG GTGAGCTCGC TGTCCGGTGA CGCCGAGGCG AGCGGCATGA CCGCTCTGCA GTCCCTCGCG CTGCTCTCCG CGCTGCCGTT CTCCATCGTG ATGATCGGCA TGTGTCTCTC GCTGTGGCGC TCGCTGAGCC ACGAGGTCAA GGTCATCGAG AGGCTCGAGC TGCGCCTGCG CCAGCGCGAG TTCATGGAGC GCTACTCCGA GGAGATCGCC GACCAGGTCG ACGCACAGGT CGAGAAGGCG GTCGCGAGCG AGCTCGAGGG AGGCTTCGGC CAGCAGTTCC AGCAGCAGCT GGACCAGAAG GTCCACGAGC ACGTCATCGA GCACCTCTCG ACGTACACCG GCGAGGTGCC GCTCCCGCCG ACGGACGGCG GCCCCGGCGA CGGCACCGCC GCCGGCCCGA ACGGCGGATC CGGTCGCGGC AAGCGCCGGA TGCGCAACCC GTTCACCAAG GAGCAGTGA
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Protein sequence | MERGIVSAPT AKSPSSPTAD PPAEGNYSLS KPVFFFAGGI ILIAVLFALI LPDVFNDVIS TLNSTVVDSI GWYYVLIVTA FVVFGIVVAV SRMGSIKLGK DDDVPEYSVF SWFAMLFAAG MGIGLVFWGA AEPLTFFADT AAPGIPPNAA DMDDPTRAER ALGQTFLHWG LHAWGIYVVV GLAVAYAVHR KGRPVSIRWA LEPVLGKRTD TWIGDLIDII ALVGTLFGIA TSLGFGVNQI AAGLDHLGVL PNSTIVQVII VIVVTALATL SAASGVDKGI KFLSNLNMGL AALLLVTVLI LGPTLFLLRD VVSNIGFYLQ NFLQLAFQTL PFRGEDGGKW LGSWTTFYWG WWISWSPFVG VFIARISKGR TVREFITGVL LVPTSLTFLW FTIMGGTALY ESVLNGVDFT DAAGAIDPNT ALFDTFAQLP AGALLSGIAV VLVSIFFITS ADSGAFVMDM IAHKGDPNPP KITRIFWAST SGLIAASLIW VSSLSGDAEA SGMTALQSLA LLSALPFSIV MIGMCLSLWR SLSHEVKVIE RLELRLRQRE FMERYSEEIA DQVDAQVEKA VASELEGGFG QQFQQQLDQK VHEHVIEHLS TYTGEVPLPP TDGGPGDGTA AGPNGGSGRG KRRMRNPFTK EQ
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