Gene Bfae_06060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_06060 
Symbol 
ID8399154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp701677 
End bp702813 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content69% 
IMG OID644996689 
Productmembrane protease subunit, stomatin/prohibitin 
Protein accessionYP_003154061 
Protein GI257067806 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGCT TCATCCTCTT CCTCGTCCTC GGCGTCGGTC TCCTGATATT CCTGGTGATC 
GTCGCGGCGC TCCTGTTCGG CGGGCTGCGC ACCTCGCTGA TGTTCACCGT GCACACCCAG
GAGGCGGTGA TCGTCGAGCG CTTCGGCAAG TTCAAGCGCG TCGCGCAGGC GGGCCTGAAC
TTCAAGACGC CGTTCATCGA CAGCACCACC AAGCCGGTCT CGCTGCGCGT GCAGCAGCTC
GAGGTGAACA TCGAGTCCAA GACCAAGGAC AACGTGTTCG TCAACGTCCC GGTCGCGGTC
CAGTACCGGA TCCGCGAAGA GCAGGTCATC GACGCGTACT ACAAGCTGTC GAACCCCGAG
GCGCAGATCC GCTCCTACGT GTTCGACACG GTGCGCTCGG CCCTGAGCTC CCTCGAGCTG
GACGAGGCCT TCGAGTCCAA GGACGACATA GCCCGCAGCG TCGAGAGCAC CCTCTCCGCC
CGCATGCAGG AGTTCGGCTT CAACATCATC AACACCCTGG TCCAGGACAT CTCCCCGGAT
CAGCGCGTGC GCGACTCGAT GAACTCCATC AACGCCGCCC AGCGCGACCG CGTCGCGGCG
CAGTCGCTCG CCGAGGCGGA CAAGATCAAG CGCGTCACCC AGGCCGAGGC CGAGGCCGAG
TCCAAGCGCC TCCAGGGTGA GGGCGTCGCC GCGCAGCGCA AGGCGATCGC CCTCGGCATC
GCCGAGCAGT ACGAGATGCT GCGCAAGGTG GGCATCGAGA ACTCCGCCGA GCAGCTGCTG
CTCATGACGC AGTACTTCGA CACCATGCAG GACGTGGCCC GCAACGGCCG CTCCAACGTG
CTGTACCTGC CCTCGAACCC CGGCGCCGTG GGCGGCATGG GGGACGAGAT CCGCACCGCG
ATGCTCCAGT CGCAGGCGGC GGCCGAGGCG TCCCAGGACG CCGACGTGGC CGATGCCGAG
AACCGTCGGC GCCTCTCCGC CGACCAGCTG CGCGAGCAGG AGGAGGCGCG GGCGCAGCGG
GCCCGGCAGA AGGCCGAGCA GCGTGCCCGC GAGGCGAAGC AGCAGGCCCA GCAGGCGCCG
GAGGGCCAGC CGGGCGGCGA GGTGCCGCCG TGGGCGCACC CCGGCAGCGC GGGCTGA
 
Protein sequence
MEGFILFLVL GVGLLIFLVI VAALLFGGLR TSLMFTVHTQ EAVIVERFGK FKRVAQAGLN 
FKTPFIDSTT KPVSLRVQQL EVNIESKTKD NVFVNVPVAV QYRIREEQVI DAYYKLSNPE
AQIRSYVFDT VRSALSSLEL DEAFESKDDI ARSVESTLSA RMQEFGFNII NTLVQDISPD
QRVRDSMNSI NAAQRDRVAA QSLAEADKIK RVTQAEAEAE SKRLQGEGVA AQRKAIALGI
AEQYEMLRKV GIENSAEQLL LMTQYFDTMQ DVARNGRSNV LYLPSNPGAV GGMGDEIRTA
MLQSQAAAEA SQDADVADAE NRRRLSADQL REQEEARAQR ARQKAEQRAR EAKQQAQQAP
EGQPGGEVPP WAHPGSAG