Gene Bfae_05560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_05560 
Symbol 
ID8399104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp645519 
End bp646532 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content74% 
IMG OID644996640 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_003154012 
Protein GI257067757 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0332044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTACG TCCTGCAACG CACCGGGGGC GCGCTCCTGG TGCTGGTCCT CGCCTTCACC 
GCCGCGTACA TCCTGCTCAC GGCCCTGCCC GGCGATGCCG TGCTGGCCCG CTACGGCAAC 
CCCGATCTGG GGCTGACCCC GGAGCAGCTC GCCGAGATCC GCGCCGCCTT CGGCGCGGAC 
CGCCCCGCGG TGCTGCAGTA CCTCGACACG GTGGTCTCCT TCCTGCAGGG GGATCTGGGG 
TATTCGGTCC AGAGCGGCGC GGCGGTCTCC GCCCTGCTCG CCGAGGCGCT GCCCTCCACG 
CTCACCCTCG CCGCGCTGGG CCTGCTGCTC GCCGTGGTGC TCGCGGTGAC CATCGCGTTC 
ACCGCCACCC ACGGCAGCCT GCGCGGCACC CGGGCCACCA CCTGGCTGCG CGGCGCGCTG 
CGGGGCCTGC CCCCGCTGAT GGTGTCCCTG CCGGTGTTCT GGATCGGGAT CATGCTCATC 
CAGGTGTTCT CGTTCCGGCT GGGCCTGGTC CCGGTGCTGA ACGCGAGCCC CGCCCAGTCG 
CTGATCCTGC CGGTCGCGAC GCTCGCCCTG CCGATCGCGG CGCCGCTCGC GCAGGTGCTG 
ATCCGTTCGA TCGACGAGGT CTCCGCCCAG CCCTTCGTGG CGGTGGCCCG CGCCCGCGGC 
GCCTCCACCT GGTGGCTGCT GTGGCGCACG GTGGCCCGCA ACGCCCTGCT GCCCACCCTG 
ACGATGGCCG GGCTGCTGTT CGGCGAGCTC GTGGGCGGCG CCGTGGTCAC CGAGGCGGTG 
TTCGGGAGGA TGGGCGTCGG CCAGCTCACC GCCCAGGCCG TCGCCGCGCG CGACACCCCC 
GTGCTGATGG CCGTGGTGGT GCTGTCCACC ATCGTGTTCG TGCTGGTGAA CCTCATCGTG 
GACCTGCTGT ACCCGGTGCT CGACGCCCGG CTGCGCCGCA CCGACGCCGC CCCCGCGGCA 
TCCGGAGCCG GCACGTCGGG CTCCACCACC GAGCAGAGCG AGGTGACCGC GTGA
 
Protein sequence
MRYVLQRTGG ALLVLVLAFT AAYILLTALP GDAVLARYGN PDLGLTPEQL AEIRAAFGAD 
RPAVLQYLDT VVSFLQGDLG YSVQSGAAVS ALLAEALPST LTLAALGLLL AVVLAVTIAF 
TATHGSLRGT RATTWLRGAL RGLPPLMVSL PVFWIGIMLI QVFSFRLGLV PVLNASPAQS 
LILPVATLAL PIAAPLAQVL IRSIDEVSAQ PFVAVARARG ASTWWLLWRT VARNALLPTL 
TMAGLLFGEL VGGAVVTEAV FGRMGVGQLT AQAVAARDTP VLMAVVVLST IVFVLVNLIV 
DLLYPVLDAR LRRTDAAPAA SGAGTSGSTT EQSEVTA