Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_05540 |
Symbol | |
ID | 8399102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 642712 |
End bp | 643608 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644996638 |
Product | ectoine hydroxylase |
Protein accession | YP_003154010 |
Protein GI | 257067755 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | [TIGR02408] ectoine hydroxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCACGG TGACCATGAC CGACGATCTC TACCGCACGC GGCTCACGGA GGCGAAGGAG CCTTTCGCCC GTGAGCATCC CACGGTGTGG GGGAGCGCCG ATGACGGCCC CTTCGACGCC GATGCGCTGC GCGCCCACGA CGAGCGCGGC TTCACGATCC TGCCGGACTT CATCACCGGC GAGGAGGTGG AGACCTACCA GGCGGAGCTC GACCGGCTCA CCTCCGATCC CTCGCTGCGC GGCGACGAGC GCGTCGTCAC CGAGCGCGCC TCCGGCGAGG TCCGCTCGAT CTTCGCCGTC CAGCAGCTCA GCGAGCTGAT CGACCAGCTC TCCCGCGACC CGCGCCTGCT GGATCGTGCC CGCCAGCTGC TCGGCTCGGA CGTGTACCTG CACCAGACCC GCATCAACTA CATGCCCGGC TTCAAGGGCA GCGGCTTCTA CTGGCACTCC GACTTCGAGA CCTGGCACGC GGAGGACGGC ATGCCCGCGC CCCGCGCGGT GAGCTGCTCG ATCGCGCTCA CGCCGAACTT CCCCTACAAC GGCGGGCTCA TGGTGATGCC CGGCTCGCAC CGCACCTTCG TGCCGAGCCT GGGGGAGACC CCCGAGGACA ACCACAAGTC CTCGCTCAAG GAGCAGAAGA TCGGCGTGCC CTCCGAGGAG GCCATCACCG AGATGGCCCA CCGCCACGGC ATCGACCAGT TCACCGGCCC GGCGGGCTCC GCCCTCTGGT TCGACGCGAA CATCATGCAC GGCTCGGGCA ACAACATCAC CCCGTTCCCG CGCTCGAACA TCTTCCTGGT GTTCAACAGC GTCGAGAACG CGCTGCAGGA GCCGTACGCG GCCTCCGCGG TGCGCCCGGA CCACATCGCG CACCGGGACG CGCAGCCGCT GAGCTGA
|
Protein sequence | MSTVTMTDDL YRTRLTEAKE PFAREHPTVW GSADDGPFDA DALRAHDERG FTILPDFITG EEVETYQAEL DRLTSDPSLR GDERVVTERA SGEVRSIFAV QQLSELIDQL SRDPRLLDRA RQLLGSDVYL HQTRINYMPG FKGSGFYWHS DFETWHAEDG MPAPRAVSCS IALTPNFPYN GGLMVMPGSH RTFVPSLGET PEDNHKSSLK EQKIGVPSEE AITEMAHRHG IDQFTGPAGS ALWFDANIMH GSGNNITPFP RSNIFLVFNS VENALQEPYA ASAVRPDHIA HRDAQPLS
|
| |