| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_05450 |
|---|
| Symbol | |
|---|
| ID | 8399093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 631700 |
|---|
| End bp | 634261 |
|---|
| Gene Length | 2562 bp |
|---|
| Protein Length | 853 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644996629 |
|---|
| Product | GTPase subunit of restriction endonuclease |
|---|
| Protein accession | YP_003154001 |
|---|
| Protein GI | 257067746 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1401] GTPase subunit of restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA TGTGGGGCAT CCACAACGAC CAGATTCCGG CTGCAGAGCT GCTTGCCGGG
CAGTTCGTCT CCATCGGCTG GAACGAGATC GATGATGTGC GCGAGATCGG GAACGACCAG
ACGGCGCTCA AGGCCGCGCT CGCCGCAGCG AACCCTGACG CGAAGCCCGG GGCGCTCCCA
GTCTGGGCAG GGGTCCTCCG CCGATTCGCG TTCGAGATGA GCGAAGGTGA CCTCGTCGTC
GCCCCCAGCA AGCAGGCGCC GGTCTTCAAC ATCGGGCGCA TCGCCGGTCC TTACGAGCAT
CACCCGGAGG TGCCCGAGCA TCGGCACCGC CGGCCGGTCG AGTGGCTCGT GACCGATGTG
CCCCGCACCG CATTCACGCA GAGCGCGCTC TATGAGATGG GCGCGGTGAT GACCCTCTTC
CGGGTGACCA AGCACGCCGA GGAGTTCGAA CGCGTCGTCG AGAACGGCGT GCCCGCCGTC
GCTGCGGCTC CGGAGCGTCG GACCCGGGTG CGCCATGGAC TGCTCCAGCG AACTGTTCTC
GAGGTGCTCC GTGATCGAGG GTCCACCCCA CGCCACGAGA TCATCAAGGA CGTCGCCACG
CGGATCGAAC TCACGGGCTA CGAGACGTCG AGGACGGCGA AGGGCATCCC TCGCTTCGAG
GTCAGCATCA CCTGGGGCTC GGTCGACATG GTCGCCGCCG GATGGATCCT GAAGACCAAG
CGCGGATGGA TTCTCACCCG CGAGGGCCGC GATGTCCTCT CGAAGAGCAC CGAGGCCGAC
GACCTCTCGA AGATCTCCGG CGCTGCGTAC AAGGAGCTCC GCGCCGCCAA GCGCGCCCAA
GTGGGCCGGT TCAAGACCGA CCGGTACCCG CTGATCGACG AAGCAGTGAA GCTGCTGGAG
GAGGGGCAGT GGACGACGTA CAGCGATATC GCCGCTGTCG TCGGCTCGAA CCCACCGAGC
GTCGGCGAGT ACCTGCTCAA CCGCGCCATC GGCATCGACG GGCGGTATCG CGTCGTCCCC
GTCGGCCAGC CCCCGTACCG CGATGAGGAC CGTGCGGCCC TCGAAGCGGA GGGGGTCTCC
TTCGACGACC GAGGACTGCC CGACCCGCTC AAGAAGGTCT CCACCGAGGA CCTCCGCGAG
TCGATGGATC TGCTGGGCTT GCTGCCTGGC GTGCCACGTC GAGCATGGAT GGTGCGGGGC
AGTAGCGTCG CCGGCCAGGA TCTCGTTCCC GCATGGCTCG ACGACGGAGA GGTCACCCTC
CTCACGTCCC GGCTCCGGCC GGTGCAGTTC GGCGCCTCCC GCGATGAGCT CAAGCCGATC
ATCGACGAGG ACTACGCGCA TGCGTCCTAC GACGTGAGGG TCGAGAAGAT GGACGATGCG
CACGCGTTCC TCACCCGGAT GCAGGAGGGC CATCTGGTCG TCACCGTCGA CGACGGACGG
GTGTTCGTCG GCACGATTCT CGAGGCGGCG CGCCAGCGCG CCACGACCGC CGGTAGTTCC
GAGTTGGTGC GGGATGTCGA ATGGGCGGAT CCGGGTGGTG TCGCACTCTC TGAGATCTCC
TCGACGCTGT CCACCAGGCT CAAGGTGCAG CGGGACATCG TGGACCTGAC ACAGCAGATC
GATCTGATCG AGGATCTGCT CGACGCGGAG GAGGAGAACG TCCCGCCGGC CATCGTCGAG
CGCGCGCCCC TGCGCGAGGC ATCCCCGGAG CTGGCTGAGG ACCTGCACGT TCCACAGGCC
TGGCTCCAGG AATGCATCGA CCTGCTCGAT GACAGGCCCC AGCTGATCTT CTATGGCCCG
CCCGGCACCG GGAAGACGTT CCTCGCCCAG GCCATCGCGA AGCACATCGC GGGCGAGAAC
GTCCGCCTCG TGCAGTTCCA CCCGGCGTAC TCGTACGAGG ACTTCTTCGA GGGATACCGC
CCGCAGGAGG GAGGCGGGTT CACCCTCAAA CCGGGCCCGC TGCGCAAGGT GGTCTCCCAG
GCCAAGGAGA ACCCGCAGGA CGCCCACGTG CTGATCATCG ACGAGATCAA CCGCGGCAAC
CTCGCGAAGG TCTTCGGAGA GCTCTACTTC CTCCTCGAGT ACCGCACGGA GAACGTTGAG
CTGCTCTACG CGGACGAGGA GTTCAACCTG CCGGAGAACG TCTTCATCAT CGGCACGATG
AACACCGCGG ACCGCTCGAT CGCTCTCGTG GACGCGGCGA TGAGGCGGCG CTTCTCCTTC
CTTCCACTGC ACCCGTCGGA GGAGCCGACC AACCGGATCC TTCGTTCATG GCTCAGTGCG
GAGGGCCGCC CCCGCAGGGT GGCTGACCTG CTCGACGAGC TCAATCGCCG GATCGACGAT
CCCGACTTCA AGATCGGCCC GTCGTACTTC ATGCGCTCTG CGGTGCACCG CGAAGGCGGT
CTCGAGCGCA CCTGGAGAAC GTCGATCCTG CCGTTGCTCG AGGAGCACCA CTTCGGAGAG
ATGGATGCGA GAGCAGTCAG AACCAGGTAC GGCCTGGAGG CGGTCTCCGC CGCTGTGGAC
AGGACCGAGG ATCCCACCGA TGCGCCGTCT CGAACTCATT GA
|
|---|
| Protein sequence | MSTMWGIHND QIPAAELLAG QFVSIGWNEI DDVREIGNDQ TALKAALAAA NPDAKPGALP
VWAGVLRRFA FEMSEGDLVV APSKQAPVFN IGRIAGPYEH HPEVPEHRHR RPVEWLVTDV
PRTAFTQSAL YEMGAVMTLF RVTKHAEEFE RVVENGVPAV AAAPERRTRV RHGLLQRTVL
EVLRDRGSTP RHEIIKDVAT RIELTGYETS RTAKGIPRFE VSITWGSVDM VAAGWILKTK
RGWILTREGR DVLSKSTEAD DLSKISGAAY KELRAAKRAQ VGRFKTDRYP LIDEAVKLLE
EGQWTTYSDI AAVVGSNPPS VGEYLLNRAI GIDGRYRVVP VGQPPYRDED RAALEAEGVS
FDDRGLPDPL KKVSTEDLRE SMDLLGLLPG VPRRAWMVRG SSVAGQDLVP AWLDDGEVTL
LTSRLRPVQF GASRDELKPI IDEDYAHASY DVRVEKMDDA HAFLTRMQEG HLVVTVDDGR
VFVGTILEAA RQRATTAGSS ELVRDVEWAD PGGVALSEIS STLSTRLKVQ RDIVDLTQQI
DLIEDLLDAE EENVPPAIVE RAPLREASPE LAEDLHVPQA WLQECIDLLD DRPQLIFYGP
PGTGKTFLAQ AIAKHIAGEN VRLVQFHPAY SYEDFFEGYR PQEGGGFTLK PGPLRKVVSQ
AKENPQDAHV LIIDEINRGN LAKVFGELYF LLEYRTENVE LLYADEEFNL PENVFIIGTM
NTADRSIALV DAAMRRRFSF LPLHPSEEPT NRILRSWLSA EGRPRRVADL LDELNRRIDD
PDFKIGPSYF MRSAVHREGG LERTWRTSIL PLLEEHHFGE MDARAVRTRY GLEAVSAAVD
RTEDPTDAPS RTH
|
|---|
| |