| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_04860 |
|---|
| Symbol | |
|---|
| ID | 8399034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 555139 |
|---|
| End bp | 557610 |
|---|
| Gene Length | 2472 bp |
|---|
| Protein Length | 823 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644996573 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_003153945 |
|---|
| Protein GI | 257067690 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGCAGG AGAACACTGC CCCCGAGCCC GATGCATCCC GCCGGGCCCC GCTGCGCGAC
CGCGAGGATC TGTCGATCTA CTGGGACAAC CATCTGCGAG TCGCGTTCGA GCAGTCTGCA
CCGCATGACC TGCCTGCAAT GGTCGAGGCC AGCCTCGCGC ACGTGGTCAT GCTGCGGGAG
ACCGGCGCGC TCACCGAGCA GCGCGCGGAC CGACTTCTTG GCGGGCTGTT GACGCTCTGG
CGGAGATGGG GCGACGCCCA GCCCGGGGAG GACTGGCGAC CGCGAGTCAC CTCCCACCCC
TTCGACGGCT CGGTGGAAGA CCCCTACTAC TACCTCGAGC AGCAGCTGGC CGCTGCCTGC
GGGATCAGCA CATCGGATCT GGATGTGCAG CTCGCCCGCA GCCGCAATGA CCTGGACGCG
GGAGTGTTCC GCATGATCCT GCGTCGGGGG ATCTTGGACC TCGCCGAGCT GCTCCTGCAG
GCGGTCCGAG ACCTGGAGGA GGCTGCTGCC CGCACGGTGG ATGCATTGCT CATCGGGCAC
ACGCATCGTC GACCGGCTCA GCCGACCACG ATTGCGCACG TTCTCTCCGG GCTCGCCGAA
GCGTTCCTCT CGCAGGCGGA GGAGCTGCTG TCCGTATACG ACGAGATGAA CGTGTCCCCG
CTCGGCTCGG CCGCGTTCAC CGGCACAGAC ATCGCGATCG ACGCGCAGCG CGTAGCGGAC
CTGCTGGGCT TCTCGAGCTC TTTCACCGCC TCCTACGAAG CGGTCGCGGG CGCCGAGCAC
TTCATGCGAC TGGCCGGTCT GCATGCCCGC ATCGCGTCGA CCGGGGCACG ATGGGCGCGG
GTGCTGCAGG AGTGGATGAA CCTGGGCTGG GTGCGGATGC CCGACGAGTT CACCCAGGGC
TCTTCGATCA TGCCGCAGAA GAAGAATCCC GTCGTGCTCG AGCACCTCGT CTCGATGTCC
GGCGCCGCGA ACGGCGAGAC GAACGCCGTG TACACCACGA TCGCCGCCGG CTGGTACGAG
GACTCGAACA ACGCCACCAC CGACGTCCAA AAGCATCTGT GGTCCTCGAC CGAACGCATC
ATCCGCTTCG TGCGCCTGAT CGACGGGCTC ACCCTCGAGA TCGAGCCCGC AGCCCTGCCC
TCCGACGAGG ACATCGTCCG CTCCGGCGCC ACCACCACGG CGGTCGCTGA AGCGCTCGCG
ACCCACTCCG TCCCATGGCG CAGCGCACAC GACGTGGTGG GCACGCTGTT CCGGCAGGGC
GATCCGACCA CGTGGGATGA GGGACAGGTC GAAGCAGCGC TCGCCGAGGC CGCGATCGAC
GACGACGGAC GCCTGCGCGA CCTGGTGCTC TCCTCGGGAC GCGACCCGCG ACGGATCCTG
GAGCGCGAAC AGCCCGGATC CCCGGGACGG CAGGCCATCG CCATCGCGTT GGAGCACGCC
GAGCAGCGCG AACGGTCGCT CGTGAGGCAA TTCCAGGAGC GGCGGCGAGC GCTGGACACC
GCGCGCGAAC AGCTGCTCAC GACGGCGACG GACCTGGCCG ACATCAGGAC CACCGGATGT
GCTCTCAGCG TCATCGGCAA TGCGAACCTC GATGTCATCG TGCACGCCGC GACGACGTTC
CCACCCGCGG GAACCGAACA GATCGTGCCC GAGATCGAGG TGCGGCTGGG AGGATCCGCG
GCGATCGCCG CACAGCGTGC CGCCCAGCTC GGCCTCGCGA CCCGACTCAC CGCGAAGGTG
GGTGACGATC CTTCAGGGCA GATGGTGCGA GCGCTCGCCG AGGTCGACGG GCTCGACCTG
GACCTCATCA CGGCGCAGTC CGTCAGCTCC GGACTGACGG TCGTCTCCGA GGAACGGGGA
TGCGAGCGGT CGTTCCTGTC CTCGCTCGGA GCAATGGGGA GCTTCGCCCC GGAGGACGTT
CGCGCCGAAG CATTCGAGGC GAAGTTCGCG CTTTTCAGCG GGTATTTCCT CTTGCCGGAG
CTCCAGGGTG GTGCCGCTGC GGCGCTGCTC CGGAGGGCCC GAAGCAGTGG AGCCACCACT
GCGATCGACA CGGGTCATCC TGACGGCGGG TGGACCGAGC GCACGCGCGC AGAGATCTTC
GAGCACGTGC TGCCCCATAC CGACATCATC CTGCCCAACG AGAGCGAGCT GCTCGGACTG
ACCGGCGTCG CGGGTGTCGA GGACGCGGCA CGTGACCTCT CCGCACGGAC CGGAGCACTG
GTCGTGGCGA AGCTCGGCGC GGAGGGAGGG CTTGTGTGCA CGGGCGAAGA GGTGCATCGA
GCTCCCGCAC CCGCAGTGAC CGCTCGGGAC ACCACCGGGG CCGGCGACAC GTTCAATGCC
GTCTTCTTCT GGGCGCTCAG CCGCGGCCTG GACGTCGCCG ACGCTCTCGA TGCGGCGGTC
GCCGCTGCCT CACAGCTGGT GGCCTTGGAG CCGCACGCGC GGGCAGCGCA TCTGCGCTCT
CTGCGCGTCT GA
|
|---|
| Protein sequence | MTQENTAPEP DASRRAPLRD REDLSIYWDN HLRVAFEQSA PHDLPAMVEA SLAHVVMLRE
TGALTEQRAD RLLGGLLTLW RRWGDAQPGE DWRPRVTSHP FDGSVEDPYY YLEQQLAAAC
GISTSDLDVQ LARSRNDLDA GVFRMILRRG ILDLAELLLQ AVRDLEEAAA RTVDALLIGH
THRRPAQPTT IAHVLSGLAE AFLSQAEELL SVYDEMNVSP LGSAAFTGTD IAIDAQRVAD
LLGFSSSFTA SYEAVAGAEH FMRLAGLHAR IASTGARWAR VLQEWMNLGW VRMPDEFTQG
SSIMPQKKNP VVLEHLVSMS GAANGETNAV YTTIAAGWYE DSNNATTDVQ KHLWSSTERI
IRFVRLIDGL TLEIEPAALP SDEDIVRSGA TTTAVAEALA THSVPWRSAH DVVGTLFRQG
DPTTWDEGQV EAALAEAAID DDGRLRDLVL SSGRDPRRIL EREQPGSPGR QAIAIALEHA
EQRERSLVRQ FQERRRALDT AREQLLTTAT DLADIRTTGC ALSVIGNANL DVIVHAATTF
PPAGTEQIVP EIEVRLGGSA AIAAQRAAQL GLATRLTAKV GDDPSGQMVR ALAEVDGLDL
DLITAQSVSS GLTVVSEERG CERSFLSSLG AMGSFAPEDV RAEAFEAKFA LFSGYFLLPE
LQGGAAAALL RRARSSGATT AIDTGHPDGG WTERTRAEIF EHVLPHTDII LPNESELLGL
TGVAGVEDAA RDLSARTGAL VVAKLGAEGG LVCTGEEVHR APAPAVTARD TTGAGDTFNA
VFFWALSRGL DVADALDAAV AAASQLVALE PHARAAHLRS LRV
|
|---|
| |