Gene Bfae_04840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_04840 
Symbol 
ID8399032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp552275 
End bp553366 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content67% 
IMG OID644996571 
Productspermidine/putrescine ABC transporter ATP-binding subunit 
Protein accessionYP_003153943 
Protein GI257067688 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAG TCGACCTCGA GAACGTCACC AAGATCTACA GCGGGAGCAC ACCTTCCGTC 
GATGATGTCT CCCTGACGGT CGGGGACGGT GAATTCTTCA CGCTGCTGGG CCCGTCCGGC 
TGCGGAAAGT CGACCACCTT GCGCATGATC GCGGGGTTCA TCAACCCCAC ATCGGGCAAC 
ATCCGCTTCG GCGAGCGCGA CGTCACGAAC CTCCCGCCGC ACAAGCGCGA TACCGGCATG 
GTGTTCCAGA ACTACGCGCT CTTCCCCCAT ATGGATGTCG CCGGGAACGT GGCCTATGGG 
CTGTCGATGC GGCGTGTCGC GAAGGGGGAG AAGCGGACCC GGATCGCAGA GGCCCTCGAG 
ATCGTGGGCT TGACGGGCTA CGCGGACCGG CGCATCGATC AGCTCTCCGG CGGACAGCAG 
CAGCGCGTCG CGCTCGCCCG CGCACTCGTG ATCCAGCCTT CGGTGCTGCT CCTCGACGAG 
CCTCTCTCGA ACCTCGACGC GAAGCTGCGG GAGGAGACCC GCGCTCAGAT CCGACAGATC 
CAGCAGCGCG CAGGCACCAC GAGCGTCTAC GTCACCCATG ACCAATCCGA GGCGATGGCG 
ATGTCCGATC GCATCGCGGT GATGAACGCC GGGGTACTCC ACCAGGTCGG GGCACCGCGC 
GAGATCTACC GCCGTCCCAC CACGAGCTTC GTCGCTCGCT TCATCGGTCG CTCGAACGTC 
CTTCTCGGCA CCGTGGAAGA GACCGGGGCC GAGCAGATCG CCGTCCGCCT CAGCGGTGGT 
GAGGTCCTGT TGGCGCCCGT GGCGGAGGGG ACGCTCTCGG CCGACGTCGC CGTGGGCGAC 
GACGTCGCTC TGTCGGTCCG GCCCGAGACG ATGCGCATCG AACCCGCGCC CGCCGAGAGC 
GGCACCGACG TGGGAGCGAT CCGCGCGGCA GTCCGGATGA CGGAGTTCAC CGGTTCGAGC 
TGCGTGATCT GGTTGCGGTA CGGAGACGAA GACCTTCTGG CGACCATTCC GGACACCGAC 
GACCTGCCGG AGGCTGGCGA CGAGGTGTTG CTGCGACCGG ACGCGGCCCG TGCCTGGGTG 
GTGGCACCAT GA
 
Protein sequence
MNSVDLENVT KIYSGSTPSV DDVSLTVGDG EFFTLLGPSG CGKSTTLRMI AGFINPTSGN 
IRFGERDVTN LPPHKRDTGM VFQNYALFPH MDVAGNVAYG LSMRRVAKGE KRTRIAEALE 
IVGLTGYADR RIDQLSGGQQ QRVALARALV IQPSVLLLDE PLSNLDAKLR EETRAQIRQI 
QQRAGTTSVY VTHDQSEAMA MSDRIAVMNA GVLHQVGAPR EIYRRPTTSF VARFIGRSNV 
LLGTVEETGA EQIAVRLSGG EVLLAPVAEG TLSADVAVGD DVALSVRPET MRIEPAPAES 
GTDVGAIRAA VRMTEFTGSS CVIWLRYGDE DLLATIPDTD DLPEAGDEVL LRPDAARAWV 
VAP