| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_04460 |
|---|
| Symbol | |
|---|
| ID | 8398994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 509497 |
|---|
| End bp | 511008 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644996534 |
|---|
| Product | predicted nucleoside-diphosphate sugar epimerase |
|---|
| Protein accession | YP_003153909 |
|---|
| Protein GI | 257067654 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.873482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCAG CCCGCTCCGC AGACGCGCCG CTCGTGCTGG TCACCGGGGC CAGCGGCTAC
ATCGGCGGGC GTCTCGTGCC CGCGCTGCTC GAGGCCGGGC TGCGGGTGCG GGCCATGGCG
CGTCACGCCG ACCGGCTCGC CGACCGCCCC TGGCGCGACC AGGTGGAGGT GGTGGAGGCC
GATGTGGCCG ATCCCGCGAG CCTCGACGCC GCCCTGGACG GGATCGACGT CGCCTACTAC
CTGATCCACG CGATGGGCGG CGGGGACCGT TTCGCGCAGC GGGACCGCGA CGGGGCGCAC
GCCTTCGCGG GAGCCGCCGC GCGGGCCGGG ATCCGGCGCA TCGTGTACCT CGGCGGGATC
CATCCCGCCG GGGTGGAGCT CTCCGCCCAC ATGGCCTCCC GCAAGGAGGT GGGCGACATC
CTGCTGGCCG GGCCGGTCCC GGCGGTGGTG CTGCGGGCCG CGGTGATCCT CGGCTCGGGC
AGCGCCTCCT TCGAGATCAT GCGCCACCTC GCCGAACGCC TCCCGGTCAT GGTCGCTCCC
CGCTGGGTGC GCAATCGCCT GCAGCCGATC GCCGTGCGGG ACGTGCTGCA CCGCCTCGTC
GCCGCCGCCC GGCTCGAGGG CGCCCCGAAC CGCACCTTCG ACATCGGCGG CCCGGACGTG
CTCACCTTCG CGGAGCTGCT GCAGGCCTAT GCCCGGGCAG CCGGCCTGCC GCCGCGCCGC
ATCCAGGCCG TCCCCGTGCT CACCCCGCGC CTGGCCAGCC ACTGGATCGG GCTGGTCACC
CCGGTGCCCA CCTCGATCGC GCGCCCGCTG GTGGAATCGC TCGTGCACGA GGCGGTCGCC
GCCGAATCGG ACCTGGACGC CCTGATGCCC GCTCCCGAGG GCGGCCTGAC CGGCGTGGAC
CGGGCGATCG AGCTCGCCCT GCAGCGTGTG CGCGACCTGG AGGTCGCCAC CGCCTGGCAC
TCGGCGACCC CCGCCGGTGC GCCCTCCGCC CCGCTGCCCG AGGACCCGGA GTGGTCCGGC
GGGATCGTGC GGATGGACGA GCGCAGCCGG CACGTGGACG CCTCCCCCGA GACCCTGTGG
GCGGTGATCG AGGGGATCGG CGGTGAGCAC GGCTGGTACT CGTGGCGCCT GGGATGGGTC
ACGCGCGGCC TGATGGACCG GGCGCTCGGC GGGCCGGGCC TGCGCCGCGG CCGCCGCCAC
CCGCACCGCC TCGGTGCCGG CGAGGCGCTG GACTGGTGGC GGGTGGAGCG TCTCGAGCGC
GGGCGCACCC TGCGGCTGCG CGCCGAGATG CGCGTGCCCG GGCAGGCCTG GCTCGAGCTC
GGAGTCGACG CGGCCGACGA CGACGGAGCC GTGCTCCACC AGCGCGCGAT CTACCACCCC
CGCGGGCTGC TGGGCGACCT GTACTGGTGG GCGGTGCTGC CGTTCCACGG GATCGTCTTC
GGCGGGATGC AGCGCAACAT CGCCCGCGCC GCCGAATCCG CCGATCCGCC CCGTCACGAG
GAGAGCGCAT GA
|
|---|
| Protein sequence | MSPARSADAP LVLVTGASGY IGGRLVPALL EAGLRVRAMA RHADRLADRP WRDQVEVVEA
DVADPASLDA ALDGIDVAYY LIHAMGGGDR FAQRDRDGAH AFAGAAARAG IRRIVYLGGI
HPAGVELSAH MASRKEVGDI LLAGPVPAVV LRAAVILGSG SASFEIMRHL AERLPVMVAP
RWVRNRLQPI AVRDVLHRLV AAARLEGAPN RTFDIGGPDV LTFAELLQAY ARAAGLPPRR
IQAVPVLTPR LASHWIGLVT PVPTSIARPL VESLVHEAVA AESDLDALMP APEGGLTGVD
RAIELALQRV RDLEVATAWH SATPAGAPSA PLPEDPEWSG GIVRMDERSR HVDASPETLW
AVIEGIGGEH GWYSWRLGWV TRGLMDRALG GPGLRRGRRH PHRLGAGEAL DWWRVERLER
GRTLRLRAEM RVPGQAWLEL GVDAADDDGA VLHQRAIYHP RGLLGDLYWW AVLPFHGIVF
GGMQRNIARA AESADPPRHE ESA
|
|---|
| |