| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_04430 |
|---|
| Symbol | |
|---|
| ID | 8398991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 506059 |
|---|
| End bp | 507705 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644996531 |
|---|
| Product | phytoene desaturase |
|---|
| Protein accession | YP_003153906 |
|---|
| Protein GI | 257067651 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | [TIGR02734] phytoene desaturase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGG CACGCGGCCC GCGCCGAAGC CGGGATGTGC CCGCGGGGAG CGACCCGGTG
GTGGTGATCG GCGGCGGGAT CTCCGGCCTC GCCACCGCCG CGCTGCTCGC CCGCGACGGC
CACGAGGTGG ACCTGGTCGA GGCGCGGGAG GAGCTCGGCG GCCGTGCCGG CACCTGGGAG
CGCGACGGCT TCCGCTTCGA CACCGGCCCC TCCTGGTACC TGATGCCGGA GGTCTTCGAC
CACTTCTTCC GCCTGCTGGG CACCTCCGCC GACGAACAGC TCGACCTGCG CCCGCTGGAT
CCCGGGTACC GGGTGCGGTT CGAGGGCTGC GAGGAGGCGT GGGACGTGAG CGCCTCCGCG
GCCCGCAACG CCGACCTGTT CGAGCAGGTC GAGCGCGGGG CCGGGCTGCG TCTGGCCCGC
TATCTCGACT CCGCCGCCCG CACCTACGAC GTCGCGCTCG AACGCTTCCT CTACACCTCG
TACACCACGC CGCGGGCGTT CCTCTCCCCT ACGGTGCTGA CGCAGGCGCC GCGGCTGCTG
GCCCTGCTCG CGGAGCCGCT CGACCGCTTC GTGGCCCGCC GCTTCCGGGA CCCGCGGCTG
CGCCAGCTGC TCGGCTACCC GGCGGTGTTC CTGGGCTCCT CCCCGGACCG CACCCCGAGC
ATGTATCACC TGATGAGCGC GCTCGACCTG ACAGGCGGGG TGCGCTACCC GCAGGGCGGT
TTCACCCGCC TCATCGAGGC GATCGTGCGC CTCGCCGAGC ACGAGGGGGT GCGCCTGCAC
ACGGGCACGC GCGCCACCGC CCTGCTCACC GCCCCCGGTG AGAGCCGCCG CCCGAACGGT
CGCGGCCCTC GGCGCGGTGC GGCGGTGCGC GGGGTCGAGG TGCAGGCGGC CGACGGGACG
CTCCGCACCC TCCCGGCCCG GACCGTCGTG GCCACCGCCG ATCTCCACCA CGTCGAGACC
ACGCTGCTGC CGCAGGAGCT GCAGACCTAC CCGGCCTCCT GGTGGCGGCG CCGCACCCCG
GGCCCCGGCG CAGTGCTCGT GCTGCTGGGC GTGCGCGGCC GGCTGCCGCA GCTGGCCCAC
CACACCCTGT TCTTCACCCG GGACTGGGCG GAGAACTTCG GGGCGCTGCG CGAGGGGCGC
GTGCCCTCCC CCGCCTCGAG CTACGTGTGC AGGCCCTCGG CGACCGACCC CTCCGTCGCG
CCCGCCGACC ACGAGAACCT GTTCGTGCTG GTCCCCGTCC CCGCGGACCC CGGCCTCGGG
CGCGGCGGCG AGGACGGCGC CGGCGCAGCG GCGGTGGAGC GCATTGCCGA CGAGGCGATC
GCCCGCATCG CCGCGGAGGC CGGCATCCCC GACCTCGCCG AACGCATCGT GGTGCGCCGC
ACGATCGGTC CGGGCGAGTT CGCGACCGAC CTCGGAGCCT GGCAGGGCAG CATGCTCGGC
CCCGCCCACA CCCTGCGCCA GAGCGCCTTC TTCCGCGCCG GCAACGCCTC GCGCCGCGTG
GACGGACTCC TCTACGCCGG CTCGAGCACC CTGCCCGGCA TCGGCCTGCC GATGTGCCTG
ATCAGCGCCG AGCTGGTCGC CAAACGGATG CGCGGGGACC GCTCCTCCGC GCCGCTGCCC
GAGCCCTCCC CGGCGGTCCC CGCATGA
|
|---|
| Protein sequence | MSPARGPRRS RDVPAGSDPV VVIGGGISGL ATAALLARDG HEVDLVEARE ELGGRAGTWE
RDGFRFDTGP SWYLMPEVFD HFFRLLGTSA DEQLDLRPLD PGYRVRFEGC EEAWDVSASA
ARNADLFEQV ERGAGLRLAR YLDSAARTYD VALERFLYTS YTTPRAFLSP TVLTQAPRLL
ALLAEPLDRF VARRFRDPRL RQLLGYPAVF LGSSPDRTPS MYHLMSALDL TGGVRYPQGG
FTRLIEAIVR LAEHEGVRLH TGTRATALLT APGESRRPNG RGPRRGAAVR GVEVQAADGT
LRTLPARTVV ATADLHHVET TLLPQELQTY PASWWRRRTP GPGAVLVLLG VRGRLPQLAH
HTLFFTRDWA ENFGALREGR VPSPASSYVC RPSATDPSVA PADHENLFVL VPVPADPGLG
RGGEDGAGAA AVERIADEAI ARIAAEAGIP DLAERIVVRR TIGPGEFATD LGAWQGSMLG
PAHTLRQSAF FRAGNASRRV DGLLYAGSST LPGIGLPMCL ISAELVAKRM RGDRSSAPLP
EPSPAVPA
|
|---|
| |