| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_04100 |
|---|
| Symbol | |
|---|
| ID | 8398958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 471804 |
|---|
| End bp | 473477 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644996498 |
|---|
| Product | arabinogalactan endo-1,4-beta-galactosidase |
|---|
| Protein accession | YP_003153873 |
|---|
| Protein GI | 257067618 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCT CGAACGATGC GATACGGCAA CCCACACGGC GCACAGTCGT CCTCGGGACT
GCAGGGCTTG TCGCTGCGGG CTTCGGACTC GGTGCCATCG GTCCGGCCGA GCAGGCCCGG
GCGGCGGGCG ACGAGCTCAT CATGGGAGGC GATCTCGGCA TGCTCGCCGA GGTCGAAGAA
CGCGGCGGGG TCTTCTCCGA CGGCGGGATC GTCACGGATC CCGTCGCGCT CATGGCAGCC
TCAGGAATGA ACCTTGCACG CCTTCGACTC TGGGTCGACC CGTACACGGC GGCGGGTGAG
GCGTACGGCG GTGGGACCAA CGACCTGGTC GCGACGATCG CGATGGCTCG ACGGGCGAAA
GCTCACGGCA TGCGGATTCT GCTCGACATC CACCTGAGCG ACTGGTGGGC GGACCCGGGA
ACGCAGACCA AGCCGAAGGC CTGGCGATCC CTGTCCTACG CCGATCTCGT CGATACCGTC
CACGACTACA CCGAGGACGT GATCGGGCAG ATGCGATCGG CCGGTGTGCT CCCCGACATG
GTGCAGATGG GGAACGAGAC GACCGCCGGC ATCCTGTGGG ACGACGGGAA GGTCGGCGCC
GGCAATCCGG ACTTCTCCCA GCTCGCCGAG CTGCTCCGAT CCGGGATCGA CGGAGTCCGC
GGTGCGCTCG GGCCCGGCGA GGGTGTCGAG GTCATCCTCC ACCTCGACCA TGGAGGGGAC
AACGCTCTCT ACCGATGGTG GTTCGACGGC ATCGTGGCCG AGAACGTGGA TTTCGATGTC
ATCGGGCTCT CCTATTACCC GTTCTGGCAC GGGACCATGG GCGAACTCGC CGACAATCTC
AATGACATCA GCGGGCGATA CGGCAAGGAC GTCCTCATCG TCGAAACCGC TTACGCCTGG
ACCCTCGAGG ACGGGGACGG TCTCGGGAAC TCGTTCTACA CCGCCGAGGA GGAGGATGGC
GGCTACCCGG CCACCGTCGC AGGGCAGACC GCATTCCTCC GGGACCTGCG CGATATCGTG
CTCGCAGTCC CCGACGGCCG CGGCCGAGGT CTCGTCTGGT GGGAGCCCAC CTGGCTCCCC
GTCGACGGCG CCCATTGGGG GTCGGAGGCC GGGAAGGCCG ACAACGATGA CCCCGGCACG
CTGTCGAACC CCTGGGACAA CCAGACCCTG TTCGACTGGG ACGGCGAGGC GCTCAGCACG
CTCTCGGTCT TCGGCGAGCT CCCGCGAGAG AATCACGTGG TCAACGGCGG ATTCGAGGCT
GACGGATACA CCAACAGCCC GAGCGGCTGG GGCGTCTGGG CCGAGGACCC GAACGACCTG
GACGCCATCT TCACCCAAGA TCCCGCCGTC GTCGGCTCAT ACAAACTCAC GCACTGGAAG
GCTACGGCCC ACACGGTGTC GACGTTCCAG ATAATCGAGG GGCTCTCTCA CGGCACTCAC
CAGGTGTCGG CGTGGGTGCT GAACAGCGGA GGGCAGGAGG CCGCGTACAT GTACGTCAAG
GGACATGGTG CGCCCGAGGC CCGAGCCGAC CTTCCCGTGT CCTCGAGCTC GTGGATCCGC
GTCGCGCTCG AGGTGAGCGT GACGACTGGG CAGCTGGAGC TCGGCTTCTA CTCGGAAGCC
GCAGCGGATC AGTGGATCAA CGTCGACGAC GTCCGTGTCG TCGAAACCTA CTGA
|
|---|
| Protein sequence | MTFSNDAIRQ PTRRTVVLGT AGLVAAGFGL GAIGPAEQAR AAGDELIMGG DLGMLAEVEE
RGGVFSDGGI VTDPVALMAA SGMNLARLRL WVDPYTAAGE AYGGGTNDLV ATIAMARRAK
AHGMRILLDI HLSDWWADPG TQTKPKAWRS LSYADLVDTV HDYTEDVIGQ MRSAGVLPDM
VQMGNETTAG ILWDDGKVGA GNPDFSQLAE LLRSGIDGVR GALGPGEGVE VILHLDHGGD
NALYRWWFDG IVAENVDFDV IGLSYYPFWH GTMGELADNL NDISGRYGKD VLIVETAYAW
TLEDGDGLGN SFYTAEEEDG GYPATVAGQT AFLRDLRDIV LAVPDGRGRG LVWWEPTWLP
VDGAHWGSEA GKADNDDPGT LSNPWDNQTL FDWDGEALST LSVFGELPRE NHVVNGGFEA
DGYTNSPSGW GVWAEDPNDL DAIFTQDPAV VGSYKLTHWK ATAHTVSTFQ IIEGLSHGTH
QVSAWVLNSG GQEAAYMYVK GHGAPEARAD LPVSSSSWIR VALEVSVTTG QLELGFYSEA
AADQWINVDD VRVVETY
|
|---|
| |