Gene Bfae_02740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_02740 
Symbol 
ID8398822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp315474 
End bp316913 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content71% 
IMG OID644996365 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003153741 
Protein GI257067486 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase
[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.1336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGC TCGCCGTCCG CACCACGCCC ATCCCCGGGC TGCTGGTGAT CGACCTGCCC 
GTGCACGGCG ATCCGCGCGG CTGGTTCAAG GAGAACTGGC AGCGGGAGAA GATGCTGGCC
GCCGGGCTGC CGGATCTCGG TCCGGTGCAG AACAACATCT CCTTCAACCA GACCGTGGGC
GTCACGCGCG GGATCCACGC CGAGCCGTGG GACAAATACA TCTCTGTCGC GACCGGCAGG
GTGTTCGGCG CATGGGTCGA CCTGCGCCGC GGGCCGAGCT TCGGCGCGAC GTACTGGCAC
GAGATCACGC CCGATATCGC GATCTACGTG CCGCGCGGAG TGGGCAACGC CTTCCAGACC
CTCGAGGCTC CGGCCGCCTA CACCTACCTC GTCAACGCCC ACTGGTCCGC GGCGGCGCAG
GAGCAGTACA CGTTCCTGCA CCTGGCCGAC GAGACCGCCG CCATCCCGTG GCCGATCCCG
CTCGAGCAAG CGGAGCTCTC AGCCAAAGAC CGCGCGCACC CACTGCTCGC GGACGTGGCG
CCGGTGCCCC CGCGCCGCAC CCTCGTCGTC GGCGGAGGCG GGCAGCTCGG CCGGGCCCTG
GCCGCGTGGT GGTCGCGCCG AGGTGACGTC GACGTCGTCG CCCGGGAGCA CCTCGACATC
GCCGATGCGA GAAGCGTCGC CGCTTTCGAT TTCGCGCCCT ACGGGACGAT CGTCAACGCC
GCCGCCTGCA CCGCGGTGGA CGCCTCCGAG GCTCCCGAGG GCCGACGCAC CGCCTGGGCG
GTCAACGTCA CCGGCGTCGG CCATCTGGTG GAGGCCGCCC GCGCCCACCG CGCCACCCTC
GTCCACGTCT CCAGCGACTA CGTCTTCGAC GGCACCATCG AGGTGCACGG CGAGAACGAG
CCGCCCAGCC CGCTGGGTGT GTACGGCCAG ACCAAGGCTG CCGGCGACCA GCTCGTCGCG
ACCCTCCCGG ACCACTACAT CGTGCGCACC AGCTGGGTGA TCGGCGAAGG GAGGAACTTC
GTGGCCACCA TGGCAGCTCT CGCCGAGCGC GGGATCGACC CGGCGGTGGT CGACGACCAG
ATCGGCAGGC TCACCTTCAC CGAGGATCTC GCCGCCGCGA TCGACCACCT GCTCGTGGCA
CGTCCCGCCC CGGGCATCTA CAACGTCACC GGAGAGGGGG AGCCGGCCAG CTGGGCAGGG
ATCGCCGCCG AGGTGTTCGC GCTGTCCGGT CACGACCCGC ACCGGGTGAC CCCCGTGAGC
ACCGCCGAGT ACTACGCCGG CAAGGACGGC ATCGCCCCGC GCCCGGCGCA CTCGACGCTC
GACCTCGCGA AGATCCGCGC TACCGGATTC GTCCCGCTGG ACCAGCTCAC TGCGCTGCGG
GACCATCTGA GCTCCTCCCA CCCCGCAGCC CCCGCGGAGG CCCGTCTCGC GGCCTCCTGA
 
Protein sequence
MTELAVRTTP IPGLLVIDLP VHGDPRGWFK ENWQREKMLA AGLPDLGPVQ NNISFNQTVG 
VTRGIHAEPW DKYISVATGR VFGAWVDLRR GPSFGATYWH EITPDIAIYV PRGVGNAFQT
LEAPAAYTYL VNAHWSAAAQ EQYTFLHLAD ETAAIPWPIP LEQAELSAKD RAHPLLADVA
PVPPRRTLVV GGGGQLGRAL AAWWSRRGDV DVVAREHLDI ADARSVAAFD FAPYGTIVNA
AACTAVDASE APEGRRTAWA VNVTGVGHLV EAARAHRATL VHVSSDYVFD GTIEVHGENE
PPSPLGVYGQ TKAAGDQLVA TLPDHYIVRT SWVIGEGRNF VATMAALAER GIDPAVVDDQ
IGRLTFTEDL AAAIDHLLVA RPAPGIYNVT GEGEPASWAG IAAEVFALSG HDPHRVTPVS
TAEYYAGKDG IAPRPAHSTL DLAKIRATGF VPLDQLTALR DHLSSSHPAA PAEARLAAS