Gene Bfae_01480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_01480 
Symbol 
ID8398698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp162577 
End bp163884 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content69% 
IMG OID644996243 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_003153619 
Protein GI257067364 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGCA GGAATTTCAC CACCCTCCTC ACCGCCTCCG CCCTCGGCGC CGCGGCCGCC 
CCCGCGCTCA GCGCCTGCAG CAGCAGCGGT GGCGGCTCCG GCGACGGCAC CTCGCTGGTG
ATCTGGCACT ACGAGAACGA GGACTCCGCG ATGGGCCAGG CGTGGGCTCT CGCCCAGGAG
ATCTTCGAGG AGAAGCACCC CGAGGTCACC GTCACCGTCG AGAAGCAGAC CTTCGAGCAG
CTGCAGAAGA ACGCCACCAT CGTGCTCACC GGCGACGACG TGCCGGACCT GATGGAGTTC
AACAAGGGCA ACAGCACCGC CGGGCAGCTC GCCTCGCAGG GCCTGATCGA GCCGTTCACC
GACGTCGCCG CCGAGAAGGG CTGGGACCAG AAGCTCTCCG AGAGCCTCCA GGCCACCTCC
CGCTACGACG AGTTCGGCCT CATGGGCTCC GGCGACTGGT TCGGCCTGCC CAACTACGGC
GAGTACGTCT ACGTCTTCTA CAACAAGGCG ATGTTCGACG AGGCCGGCGT CTCCGTCCCC
ACCACCCTCG AGGAGTTCGA GGACGTGCTG CAGACCTTCG TGGACCAGGG CGTCGTCCCG
CTGGCCGGCG CGGGCGCCGA ATACCCGGCC GGGCAGCTCT GGTACCAGCT GGTCCTCGCC
CACGCCGACC GCTCCTTCGT GGACGCCTAC CAGCTCTTCG ACGGGGAGGT CGACTGGGCC
GGGGACCCGA TCCTCTCCGG CGCCCAGCGG TTCGCGGACT GGGTCGACAA GGGCTACCTC
GCCGGTGACT CCGCGGGCCT GACCGCCGAG GACATGGGCA CCGCCTTCAT CGCCGGCACC
TACCCGATCA TGTTCTCGGG CTCGTGGTGG TTCGGGCGCC TGGTCGCCGA GATGGAGGAC
GACTGGGGCC AGTTCCTCTT CCCCGGCACC GAGTTCGCCA TCGGCTCCTC GGGCAATCTC
TGGGTGGTCC CGGCCAACGC CGCGAACCAG GATCTCGCCT ACGAGTTCAT GGACATCACC
ATGTCCCAGG AGGTCCAGGA CCTGCTGGGG CAGAAGGGCG GCCTGCCCGT CGCGGGCGAC
ACCGACGCGA TCGAGGACGA GCGGACCCGC GAGATGACGG AGAACTTCGC CGAGGTGAAC
GAGGCCGAGG GCCTGGCCTT CTACCCGGAC TGGCCGGTGG CCGGCTTCTA CGACCAGCTC
GTCAGCGCCA TGCAGTCGCT CATCAACGGC TCGACGTCGC CGGAGCAGGC CATGGCCGAG
CTCGGCGAGG CCTACTCCAC CGGGCGGAGC GACCTCACCG GCGAGTGA
 
Protein sequence
MKRRNFTTLL TASALGAAAA PALSACSSSG GGSGDGTSLV IWHYENEDSA MGQAWALAQE 
IFEEKHPEVT VTVEKQTFEQ LQKNATIVLT GDDVPDLMEF NKGNSTAGQL ASQGLIEPFT
DVAAEKGWDQ KLSESLQATS RYDEFGLMGS GDWFGLPNYG EYVYVFYNKA MFDEAGVSVP
TTLEEFEDVL QTFVDQGVVP LAGAGAEYPA GQLWYQLVLA HADRSFVDAY QLFDGEVDWA
GDPILSGAQR FADWVDKGYL AGDSAGLTAE DMGTAFIAGT YPIMFSGSWW FGRLVAEMED
DWGQFLFPGT EFAIGSSGNL WVVPANAANQ DLAYEFMDIT MSQEVQDLLG QKGGLPVAGD
TDAIEDERTR EMTENFAEVN EAEGLAFYPD WPVAGFYDQL VSAMQSLING STSPEQAMAE
LGEAYSTGRS DLTGE