Gene Bfae_01320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_01320 
Symbol 
ID8398682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp143548 
End bp144534 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content67% 
IMG OID644996227 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_003153603 
Protein GI257067348 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.655147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATCTCC TGCGCAAGAT CGGGTTCTAC CTGGTGGCCC TGTGGGCCGC GGTGACCCTC 
AACTTCTTCA TCCCCCGCGC CCTGCCCGGC AGCCCGGTGG ATGCCGTCCT GGCCAAGCTC 
GCGCTGCGCG GCCCGGTGGA CCCCCACACC CGCGAGGCCA TCGAGGTGAT GCTCGGTGCG 
GACAACGACC GCTCGCTGAT CCAGGAGTAC TTCGCCTACC TGGGCGGTCT GTTCACCGGT 
GACCTCGGCG TCTCCGTCAC CTACTTCCCC ACCCCCGTCT CCGCGGTCGT GGGCCAGTCG 
CTGCCCTGGA CGCTGATCCT CGTGGGCCTG GCCACCACGT TCACCTTCCT GCTGGGGATG 
GTGCTGGGCA CCGTCGCCGG CTGGCGGCGC GGCACCTGGC TGGACTCCCT CATCCCCGCC 
ACCACGATCC TCCAGGCCGT GCCCTACTTC TGGCTCGCGC TGCTGTTCAT CTACGTGCTG 
TCGGTGAACC TGGGGGTGTT CCCGATCTCC GGCGGCTACG ACTACACCCT GGTGCGCCCG 
GCGTTCGACT ACCCCTTCCT CTCCAACGCC GTCTACTACG GCTTCCTGCC GGCGCTGACG 
ATCGTGCTGT CCTCCCTGGG CGGCTGGCTG CTGGGGATGC GCAACATGAT GGTCTCGACC 
CTCAGCGAGG ACTACATCCT CACCGCCGAG GCGAAGGGCC TCTCCCCGCG CCGCGTGATG 
ATCATGTACG CGGCCCGCAA CGCGATGCTG CCCAGCGTCT CCGGCTTCGC GATCTCGCTG 
GGTTTTGTGG TCTCCGGCTC GATCGTCGTC GAGACCGTCT TCTCCTACCC GGGGGTCGGC 
TTCACCATGC TGCAGGCCGT GCAGAACAAC GACTACCCGC TCATGCAGGG CATGTTCCTG 
ATCATCACCG TCTCCGTGCT CGCGGCGAAC CTCGTGGTGG ACCTGCTGTA CGGCGTCATC 
GATCCCCGCA CCCGAGCGCG AGGCTGA
 
Protein sequence
MHLLRKIGFY LVALWAAVTL NFFIPRALPG SPVDAVLAKL ALRGPVDPHT REAIEVMLGA 
DNDRSLIQEY FAYLGGLFTG DLGVSVTYFP TPVSAVVGQS LPWTLILVGL ATTFTFLLGM 
VLGTVAGWRR GTWLDSLIPA TTILQAVPYF WLALLFIYVL SVNLGVFPIS GGYDYTLVRP 
AFDYPFLSNA VYYGFLPALT IVLSSLGGWL LGMRNMMVST LSEDYILTAE AKGLSPRRVM 
IMYAARNAML PSVSGFAISL GFVVSGSIVV ETVFSYPGVG FTMLQAVQNN DYPLMQGMFL 
IITVSVLAAN LVVDLLYGVI DPRTRARG