Gene Bfae_00940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_00940 
Symbol 
ID8398644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp99057 
End bp99740 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content74% 
IMG OID644996190 
Product16S RNA G1207 methylase RsmC 
Protein accessionYP_003153566 
Protein GI257067311 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGAC ACCATGAGCA CTCCCCCGCG CACCAGCACA CCGCCTCGCA CGAGCACGCC 
GCCGCGGATC CGACCCTCTC CCCCGCCGAG CACTGGGAGC AGCGCTATGC CGGCCAGGCG 
TCGGTGTGGT CAGGCCGCGT CAACGCCACG CTCGCGCAGG TCGTGGCCGA GTTCCCGCGC 
GGCATGGCGA TCGACCTCGG CTGCGGGGAG GGCGGGGACG TGCTGTGGCT CGCCGAGCAG 
GGCTGGCAGG CGCACGGCCT GGACATCTCC ACCACGGCCG TCGGCCGGGC GCGGGCCGAG 
GCCGCCGCAC GGGGCCTCGA GGGTGCCACA TTCTCCGCGA CGGACCTCAG CACGTGGCGG 
CCGGAGCCGG GCACGGTCGA TCTGGTGACT GCCTCGTTCT TCCAGTCCGA GGTGGCGCTG 
GACCGGGTGG AGATCCTGCG CCGGGCCGCG ACGGCAGTGC GACCGGGCGG ACACCTCGTG 
ACCATCTCCC ACGCGGCCCC GCCCTCCTGG GCGGATCATC ACCCCGCACG CATGATCGAC 
GTGCATGCCG AGGCGGAACA GCTCGCGCAG CCCGAGGAGG ACTGGGTGGT GGAGGTCGCG 
GAAGAGCAGC CTCGTGAGGC CACGGGCCCG GACGGGCACG CCGGCGAGCA CCTCGATGCG 
GTGCTGGTGC TGCGCCGGCG GTGA
 
Protein sequence
MTGHHEHSPA HQHTASHEHA AADPTLSPAE HWEQRYAGQA SVWSGRVNAT LAQVVAEFPR 
GMAIDLGCGE GGDVLWLAEQ GWQAHGLDIS TTAVGRARAE AAARGLEGAT FSATDLSTWR 
PEPGTVDLVT ASFFQSEVAL DRVEILRRAA TAVRPGGHLV TISHAAPPSW ADHHPARMID 
VHAEAEQLAQ PEEDWVVEVA EEQPREATGP DGHAGEHLDA VLVLRRR