| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_00830 |
|---|
| Symbol | |
|---|
| ID | 8398633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 87945 |
|---|
| End bp | 89402 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644996179 |
|---|
| Product | family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase |
|---|
| Protein accession | YP_003153555 |
|---|
| Protein GI | 257067300 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA CCATCCTGGG CGGCGGCGGG TTCCGCGTCC CGCTCGTGTA CGAGGCGGTC
GCCACCGCCG CCACCGGCCT CACCGTCGAC GAGGTCGCGC TGCACGATGT CGACCCCGTC
CGCCTGCGCA CCATCACCGC GGTGATCGAG GGTCTCGCCG AGCGGCTGCG CGCCGAGGGC
CACGGGGCGA CGCTGCCGCG GCTGACCGCC ACCGCCGATC TGCGCGAGGC CGTCACCGGG
GCGGACTTCG TGTTCTCCGC GGTGCGGGTG GGCGGCGCCG AGGCCCGCAC GGTCGACGAG
CGGGTCGCGC TGGGGCTGGG CCTGCTGGGC CAGGAGACGA TCGGGCCGGG CGGTCTCGCC
TACGCACTGC GCACGATCCC GGTCGCGCTC GAGATCGCGC GGATGGTCGC CGAGGTCGCG
CCGAGCGCAT GGGTCATCAA CTTCACGAAC CCCGCCGGGA TCGTCACCGA GGCGATGCGC
ACCGTGCTCG GCGACCGCGC GGTGGGCATC TGCGACACCC CGATCGGGCT GGTGCGCCGC
GTGGGCCGCC TGCTGGACGT GGACCTCGTG GCCGGCGAGC GCGAGGCCCG CATCGACTAC
GTGGGCCTGA ACCATCTGGG CTGGCTGCGG TCCGTGACGG TCGACGGCGC CGAGCGCCTG
CCCGGCCTGC TGGCCGACGA CGCCGCCCTC GAGCAGATCG AGGAGGCGCG GCTGGTCGGG
AAGGACTGGG TGCGGGCCGA CGGCGCGCTG CCGAACGAGT ACCTCTTCTA CTACCTGCAC
ACCGACGACG CGATCGCGCG GATCACCGCC TCCGCCACCA CGCGCGGGGA GTTCCTCGCG
AAGCAGCAGG GCGACTTCTA CCTCGCCGCC GCCGAGGCCG CCGGCACCGG GGCCGACGCC
GATGCGGGCA GGGACGCGGG CGCGGGCCCG GGATCCTGCT GCGCCTCGCC GCTGCAGCTG
TGGCGCGAGA CGCTGCACGA GCGGGAGGCG ACCTACATGG CCGAGTCCCG GGACGAGGAG
CGGCGGCAGG AGGACATCGC CGGTGGCGGC TACCAGGAGG TGGCGCTGCG GCTCATGACC
GCGCTGGCCA CCGGACGCTC CGAGCGGATG ATCCTCGACG TGGGCAACAG CCCCGCCGGC
GGCACGGGCG CGCCGTCCGA GCGGATCGTC CCCGACCTGC CGGCGGATGC GGTGATCGAG
GTGCTGTGCC TCGTGGACGG GGACGGCGTG CATCCGCAGC CGGTGGCCCC GGTGGAGCTG
GGCCGGCTGG GGATGATGGC CTCCCTGCGG GCCGCCGAGC GGAAGATCCT CGAGGCTGCC
ATGACCGGTT CGCGGGAGGC GGCCTGGCAG GGCTTCGCGA CGCATCCCCT GGTCAGCTCC
CCCGCGCTCG GGCAGGAGCT GCTCGAGGGG TACATCGCCG GCCATCCGCA GATCGCCGCC
CTGCTCGCGG AGGGCTGA
|
|---|
| Protein sequence | MKLTILGGGG FRVPLVYEAV ATAATGLTVD EVALHDVDPV RLRTITAVIE GLAERLRAEG
HGATLPRLTA TADLREAVTG ADFVFSAVRV GGAEARTVDE RVALGLGLLG QETIGPGGLA
YALRTIPVAL EIARMVAEVA PSAWVINFTN PAGIVTEAMR TVLGDRAVGI CDTPIGLVRR
VGRLLDVDLV AGEREARIDY VGLNHLGWLR SVTVDGAERL PGLLADDAAL EQIEEARLVG
KDWVRADGAL PNEYLFYYLH TDDAIARITA SATTRGEFLA KQQGDFYLAA AEAAGTGADA
DAGRDAGAGP GSCCASPLQL WRETLHEREA TYMAESRDEE RRQEDIAGGG YQEVALRLMT
ALATGRSERM ILDVGNSPAG GTGAPSERIV PDLPADAVIE VLCLVDGDGV HPQPVAPVEL
GRLGMMASLR AAERKILEAA MTGSREAAWQ GFATHPLVSS PALGQELLEG YIAGHPQIAA
LLAEG
|
|---|
| |