| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_00540 |
|---|
| Symbol | |
|---|
| ID | 8398604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 53157 |
|---|
| End bp | 54872 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644996152 |
|---|
| Product | dihydroxyacetone kinase |
|---|
| Protein accession | YP_003153528 |
|---|
| Protein GI | 257067273 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2376] Dihydroxyacetone kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTACC TCTTCAACGA CCCGGCAGAT TTCGCGACCG AGGCGGTCGC GGGGCTCGCC
CTGTCCCATC CCGAGCACGT CGCCGTCGTC CACGGCGGCG TGGTCCGCGC GACCGAGACC
CCGAAGGGCC AGCCGGCCCT GGTGATCGGC GGCGGCTCCG GCCACTACCC CGCCTTCGCG
GGCTGGGTGG GCCCGGGCAT GGGGCACGGC GCCCCCTGCG GCAACATCTT CTCCTCGCCG
TCGGCCTCGC AGGTCTACTC CGTCGCCCGC AACGCGGAGA ACGGCGGCGG CGTGGTGCTG
GGCTTCGGCA ACTATGCCGG GGACGTGCTG CACTTCGGCG CCGCGGCGGA GAAGCTGCGC
GCCGAGGGCG TGGACGTGCG GATCATCAAG GTCAGCGACG ACATCGTCTC CAACTCCCCC
GAGAACCATC GCGACCGCCG CGGCATCGCC GGCGACCTGC CGGTGTTCAA GATCGCCGGC
GCCGCGATCG AGGCGGGCGC GGATCTCGAC GAGGCCGAGC GCCTCGCCTG GAAGGCCAAC
GACGCCACCC GCTCCTTCGG CGTCGCCTTC GACGGCCCCA CGCTCCCCGG TGCGGAGGAC
GCCCTGTTCC ATGTCCCGGA CGGGCAGATG GGCGTGGGCC TGGGCATCCA CGGCGAGCCC
GGGGTGCGCG AGGAGCCGAT CGGCACGGCG GATGACATCG CGGCGATGCT GGTCGAGGGC
GTTCTGGCCG AGCAGCCGGA GCGCGCCGAG GGCGGCTACC AGGGCCGCGC CGCGGTGCTC
GTCAACGGTC TCGGCACGGT GAAGTACGAG GAGCTGTTCG TCGTCTATGC GAAGGTCGCC
GAGCTGCTCG AGCAGGCGGG GATCACGCCG GTGCGGCCCG AGGTGGGCGA GCTCGTCACC
AGCCTGGACA TGTCCGGGCT CTCCCTGACC CTGGTGTTCC TCGACGAGGA GCTCGAGCAG
CACTGGCTCG CGCCGGTGGA CACCCCGGCC TTCCACCGCG GCGCGATGCC GCCGGTGGAC
CGGCCCCGTC GCACCTCCTT CTGGGAGGCG GGGGCCGATG AGACGCCCGC CTCGAGCGAG
GAGTCCCGTG CCGCGGCGGC GAAGGTCGCC GGCGTGCTGG AACTCTTCGA GAGCGTGTGC
GCGCGGGAGG AGGCCGAGCT CGGCCGGATC GATGCGATCG CCGGCGACGG CGACCACGGC
CAGGGCATGG CCTACGGCTC GAAGGGCGCT GCGGCCGCGG CGCGGGAGGC TCTCGAGGCC
GGCGCCGGGG CGCGCACCCT GCTGGTCCGT GCCGGCGAGG CATGGTCCGA ATCGGCCGGC
GGCACCTCCG GTGCGCTGTG GGGCGCGGCG CTGATCGCGG CCGGCAGCGT GTTCGACGAC
CAGGCCGGTG CCGAGCCCCG CACCGTGGTC GACGCGGTCG ACGCCGGCAT CGACGCCGTC
CAGCGCCTGG GCGGTGCGCA GGTGGGCGAC AAGACCATGG TCGACGCCGC CGCACCCTTC
CGGGAGGCGC TGGATGCGGC GTTCACCGGG GACGACGCCG CGGCCGCGAT CCTGCAGGCC
GCGCAGGTCG CCCGCGAGGC GGCCGACGCC ACCGCGGACA TCACCGCGAC CCTGGGCCGC
TCCCGCGTGC TCGGGGAGAA GTCGATCGGC ACCCCCGATC CCGGCGCGAT CTCCTTCTCG
ATCCTCATGA AGGAGCTCGG GCAGCACCTG TCCTGA
|
|---|
| Protein sequence | MTYLFNDPAD FATEAVAGLA LSHPEHVAVV HGGVVRATET PKGQPALVIG GGSGHYPAFA
GWVGPGMGHG APCGNIFSSP SASQVYSVAR NAENGGGVVL GFGNYAGDVL HFGAAAEKLR
AEGVDVRIIK VSDDIVSNSP ENHRDRRGIA GDLPVFKIAG AAIEAGADLD EAERLAWKAN
DATRSFGVAF DGPTLPGAED ALFHVPDGQM GVGLGIHGEP GVREEPIGTA DDIAAMLVEG
VLAEQPERAE GGYQGRAAVL VNGLGTVKYE ELFVVYAKVA ELLEQAGITP VRPEVGELVT
SLDMSGLSLT LVFLDEELEQ HWLAPVDTPA FHRGAMPPVD RPRRTSFWEA GADETPASSE
ESRAAAAKVA GVLELFESVC AREEAELGRI DAIAGDGDHG QGMAYGSKGA AAAAREALEA
GAGARTLLVR AGEAWSESAG GTSGALWGAA LIAAGSVFDD QAGAEPRTVV DAVDAGIDAV
QRLGGAQVGD KTMVDAAAPF REALDAAFTG DDAAAAILQA AQVAREAADA TADITATLGR
SRVLGEKSIG TPDPGAISFS ILMKELGQHL S
|
|---|
| |