Gene Apre_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1718 
Symbol 
ID8398530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1865269 
End bp1865748 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content35% 
IMG OID644996079 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003153457 
Protein GI257067201 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAA AACATATAGA TTTTTTTGAA TTTAATAATT CTATATTCTC TATGATTAGA 
GAAATTTCAC ATAAAATCGA CTTATTACTA CAAGATACTG CAAATGAACT AGGGATAACC
CCTCTGCAGC TAAAGATGAT TATTACCCTT TATTCAAATA GGGATAAGGC AGTATCTATC
GGTAGCCTCG GCAAGGCCAT AGGCATAACC GGAGGTAATA TTTCAAATAT TTGCAAGAGA
CTTGAGAAGC AAGGCTTTGT AAATAGAGTA AGAAGTGAAG AAGATGAGAG AGTAGTTAAC
GTGATGCTTA CAAAAGATGG AGAAAAAGCA GCAAAGATGG TAGATGACTA CTTCCAAAAA
ATAAAGGAAG ACATTCCAGA AGATGGGATA GATGTCAACT TACAAACCAT AGTTGATGAA
TTAGAAGCTC TAGAATTACT GCTCGATAAA TATATATATA GGAGTGGGTT AGATGGCTAA
 
Protein sequence
MAAKHIDFFE FNNSIFSMIR EISHKIDLLL QDTANELGIT PLQLKMIITL YSNRDKAVSI 
GSLGKAIGIT GGNISNICKR LEKQGFVNRV RSEEDERVVN VMLTKDGEKA AKMVDDYFQK
IKEDIPEDGI DVNLQTIVDE LEALELLLDK YIYRSGLDG