Gene Apre_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1709 
Symbol 
ID8398521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1857142 
End bp1858101 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content42% 
IMG OID644996072 
Producttransport system permease protein 
Protein accessionYP_003153450 
Protein GI257067194 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA ATAAAAAGAT TCTTATCCTA GGCCTAATAA GCCTTCTCGT TTGTGCGATA 
GATTTATTCA TTGGAGTGGG AGAGCTTGTT CCAAGAGACC TCGTGAGTCT AAACGAACTT
CAAAGAACAA TTCTTTTTAA AATAAGAATG CCAGAGATGG CTACCGCCCT TATTATTGGC
ATGATCTTAG GCCTTGCTGG AGCCTGTATG CAGACTATCC TAGACAATCC CCTAGCAAGT
CCCTTTACCC TAGGGGTCTC ATCTGCTGCA GGCTTTGGGG CCTCCCTCTT TCTCCTTTTA
GGTATATCGA TTAATCTTAT AGCCTTCGGG GCCATAGGCT TTGCCCTCAT AGCTATAATC
TTCGTCTATA TAATATCAAG GAGAAGCTTC GCCCACACAA GCTCCATGAT CCTTGCTGGA
ATTGCCGTCA AATTCTTCTT TGACTCGCTT ACAAGTCTAA TGCAATACAT ATCCACAGAC
GAAACCCTCT CATCAATCGT CTTTTGGCTC TTTGGCTCTG TCTCAAACAC CAACCCCAAG
CAAATTGCGA TTCTTTTCGC ATCCTTCATC CTAGCCTTCA TCCTAATCAT CAAAGACAGT
CACAAGCTTA CTAGCCTGAG ATTTGGAGAA GAAAGGGCCA AAAGTCTGGG AGTAGATGTA
AAAAGAGTAA AGATTAAGAC CTTTATGATA GTATCGATTC TTTCATCAAT CGGGGTAAGC
TTTGCAGGTG TGATAGGCTT TATAGGCGTC ATAGCCCCTC ATTTAGCAAG GAAAATCCTA
GGAGAAGACC AAAGGTATTA TCTAATAGGC TCAAGCCTTA TAGGGGCAAT TCTTTTGGTA
TTTTCATCAG GCCTATCCAA AATCGTAAAG CCTGGCGCCA TCCTTCCTAT AGGAATTATA
GCAAGTCTTG TTGGACTTCC TTTGATATTT ATATTCTTTT TTGGAGGCAA AAATGATTGA
 
Protein sequence
MSKNKKILIL GLISLLVCAI DLFIGVGELV PRDLVSLNEL QRTILFKIRM PEMATALIIG 
MILGLAGACM QTILDNPLAS PFTLGVSSAA GFGASLFLLL GISINLIAFG AIGFALIAII
FVYIISRRSF AHTSSMILAG IAVKFFFDSL TSLMQYISTD ETLSSIVFWL FGSVSNTNPK
QIAILFASFI LAFILIIKDS HKLTSLRFGE ERAKSLGVDV KRVKIKTFMI VSILSSIGVS
FAGVIGFIGV IAPHLARKIL GEDQRYYLIG SSLIGAILLV FSSGLSKIVK PGAILPIGII
ASLVGLPLIF IFFFGGKND