| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1708 |
|---|
| Symbol | |
|---|
| ID | 8398520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 1855971 |
|---|
| End bp | 1857149 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644996071 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003153449 |
|---|
| Protein GI | 257067193 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA AATTAAGAAA TATTGGTCTT TTAATAGTCT TCCTCCTAGT CCTTGCCTCT
TGTGGAGGAA ATAAGGCAGC GGAAGAAAAA GTAGAGACTA AGGTAGAAAA CAGAAAAAGC
ACAGAAGATA AGAGTGAGGC CAAACTTGTA ATTGAAGATG TCCTAGGACG AAAGGTGGAG
CTTGATAAGC CAATGGATAA GGTCATAATC CAAGGCTCAG GTTCTGGTGG TCCCTTTATG
ACTATGATGT ATCTAGATAA GGAGAATTTC TATAAGAAAA TCGCCGCCAT GGATGACGGT
ATAAGACGCG ATAGAAACGA CCTCTACCAA AGGCTAGTAG ATAAAATCCC CGAGCTAGAT
GATGTCAAAA GAGTAAGTAA CTTCGCAGAC AACGACTTTT CCCTAGAAGA GCTCCTATCC
ATAGACGCCG ATGGAATCAT CGCCCCTGTT TCCTACAAGG CCCAGCTAGA TGTAATCGAA
GATAAGATAG GCCTACCTAT AATCTATGTA GACTATCACA ACCAAGACTT CGACGATCAC
CTAAAGTCTA CAGAAATTAT AGCCAAGGCC ACAGGACTTG ATAAAAACCT CGACAAGCTA
AATGGCTTCT ATAAGGAAAA GATCGATTCG ATGAAAGAAA GGCTTAAAGA TGTAAGTGAT
AAGCCAAGGG TCTATCTGGA GCATGGCTAT GAAGGAGAAC ATGCCTACGG TAACTCCTAC
GGCAACGAAA TGATGTGGGG TAAGATCATA AACGATGCTG GCGGATACAA TCTCACAGGA
GACGTCTTGG GAGAAAAGGA AGCGACTCCC GTTTCTGAGG AGTTTGTCCT ATCTCAAGAT
CCTGATATGA TTTTTGTCAC TGGAGCAGAA TGGGTTGAAA AGCCTGAGTC AATGAAGATG
GGCTTTGGAA TTAGTCCAGA AGATGTAAGT AAAAAGATTG ATAAATACAA GATACGAAAT
GGATGGAAAG ATTTGACCGC CATGAAGGAA AAAAATGTCT ATGTCATAGG GCAGAACTTA
GCAAGGGACA TGTGTGACTT CTACGCCTAC GAGACTCTCG CCAAGACCTT TCACCCAGAG
CTTTTCGAAG ATGTGGATCC AGAGGCTGAT ATGAAAGACT TTTACGAAAA CTTCATGCCT
ATAGAATATC AGGGAACTTG GTTTAGCAAA TATGAGTAA
|
|---|
| Protein sequence | MKIKLRNIGL LIVFLLVLAS CGGNKAAEEK VETKVENRKS TEDKSEAKLV IEDVLGRKVE
LDKPMDKVII QGSGSGGPFM TMMYLDKENF YKKIAAMDDG IRRDRNDLYQ RLVDKIPELD
DVKRVSNFAD NDFSLEELLS IDADGIIAPV SYKAQLDVIE DKIGLPIIYV DYHNQDFDDH
LKSTEIIAKA TGLDKNLDKL NGFYKEKIDS MKERLKDVSD KPRVYLEHGY EGEHAYGNSY
GNEMMWGKII NDAGGYNLTG DVLGEKEATP VSEEFVLSQD PDMIFVTGAE WVEKPESMKM
GFGISPEDVS KKIDKYKIRN GWKDLTAMKE KNVYVIGQNL ARDMCDFYAY ETLAKTFHPE
LFEDVDPEAD MKDFYENFMP IEYQGTWFSK YE
|
|---|
| |