Gene Apre_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1704 
Symbol 
ID8398516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1853075 
End bp1853932 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content37% 
IMG OID644996067 
ProductPP-loop domain protein 
Protein accessionYP_003153445 
Protein GI257067189 
COG category[R] General function prediction only 
COG ID[COG1606] ATP-utilizing enzymes of the PP-loop superfamily 
TIGRFAM ID[TIGR00268] conserved hypothetical protein TIGR00268 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0697664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATAG ATAAAGAAAA AAAAGAAAAA CTCGATAATA TAGTCAAAGA TCTCCTCAAG 
GAGAAATTTG TCCTAGCCTT TTCTGGTGGT GTTGACTCAT CTCTAATCTT AAAGCTTGCA
AGCATGTATA GAGAAGAGAA AAACGATGTC GTAGCTATAA TGTATAACAC AAATACCACT
CCAGACGGAG ATTTAGAGAA CTCTCAAAAC TTAGCCTGTG AGATGGATGT CGACCTAAAA
GTTGTAGATA TTGATGTCTT CGACAATGAA TATATAAAAC ATAACACTAT TGACAGATGC
TATCATTGCA AGAGCTTCCT GTTCGAAGAA GCCTTCAAGC TAAAAGATGC GCTCGGCTAC
AAATATGTCG TAGATGGGTC AAATCTCGAA GATTACAAGG TTTTTAGACC TGGAGTAAGG
GCCCTTAACG ATAAGGGAGT TGTAAGTCCC TTAAAGGAAG CTGGCTTTAC TAAGGATATG
GTAAGAGCCT ATGCCAAAGA GTTAAACCTA TCTGTATACA AGAGACCTTC CGCCCCATGT
CTTGCAACAA GATTTCCATA CAATGAACTA ATTGATAAGG ATAAATTTGA AGCAATCAAC
AAGGCGGAAA TCTATCTAAA AGATCTAGGT CTTGAAAATG TCCGTGTTAG AGTCTACGGA
GATAATACTA GAATTGAAGT CGATAGGAAG GATTTTGATA AAGTATTCAG TCAGGTAGAT
GAGATCGTCT CAAAACTTAA AGAATTTGGT TTCAAATATA TAAATCTTGA CCTTGAAGGC
TATAGGTCCG GGTCAATGGA TGAAGTAATA GAAAAGGAAG ATAAGCTTAA GCTTAATCCA
TGGTTAGATC ATGAATGA
 
Protein sequence
MDIDKEKKEK LDNIVKDLLK EKFVLAFSGG VDSSLILKLA SMYREEKNDV VAIMYNTNTT 
PDGDLENSQN LACEMDVDLK VVDIDVFDNE YIKHNTIDRC YHCKSFLFEE AFKLKDALGY
KYVVDGSNLE DYKVFRPGVR ALNDKGVVSP LKEAGFTKDM VRAYAKELNL SVYKRPSAPC
LATRFPYNEL IDKDKFEAIN KAEIYLKDLG LENVRVRVYG DNTRIEVDRK DFDKVFSQVD
EIVSKLKEFG FKYINLDLEG YRSGSMDEVI EKEDKLKLNP WLDHE