| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1682 |
|---|
| Symbol | |
|---|
| ID | 8398494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1829949 |
|---|
| End bp | 1831280 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644996045 |
|---|
| Product | protein of unknown function DUF21 |
|---|
| Protein accession | YP_003153423 |
|---|
| Protein GI | 257067167 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000471578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTG GACCCTACCA TAGCTTGATC ACAACGCTTA GTATAATATT GTTGCTTTTT
ATAAATGGAG TATTTACAGC AATTCATACA GGACTTATTA GCCTTAACAC ATCAAAGTTA
GAAGAGGATT CTCTAAATGG AGATGAGAAG GCAGGATCTG TCCTTAAGAT TTTATCAAAT
CAGGATAGGC TCAATCAATC CTTTGAAATA GCAAATATAA TATTTTCTCT TTTAACCATA
GCTTACTTCG CAAAAAGGCT TAGAGAAGTG AGCTATGATG GGTATTTTTG GGGAGGAATC
TTATCAGAAA GATGGGTGAC TATAGTAGCT ATAGTGGTGT ATACCATTCT TAAGCTGATA
TTTGTAGACA AAATTCCCCA AAGAATTGGT GTAAGATTTC CAATGGAGAT TACCAAAATG
GCTACGGGAA TCACTAAGCT TATCATGGTT CTTACAAGAC CTATTGTGGC CTTTACTACA
GCTGTGACTA ATTTATTTAT GAATATATTT GGCATAGAGG CTAAAAATAT ACAAAAGCAA
GTTACAGGCG AGCAGATTAA ATCAATTGTC CAGATAGGTG AAGATCAGGG AATCCTAAGA
CCCATGGAGT CTAAGATGAT TCATTCCATA ATGGCTTTCG ACGACCTACT TGCAGAAGAG
ATTATGACAG CAAGGACTGA TGTCTTTATG ATCGATATAA ATGATAAGGA CAAGGAGTAT
CTCGAAGAGT TTGTCAAGAT AAAGCATGCG AGAATTCCAG TCTATGACGG GGAAGTAGAT
AATATCTTGG GCATTGTTTA TACCAAAGAC TTCCTCCTTG AGGCGACAAA AGTAGGGCTT
AAAAATGTAG AGATCAAGGA AATCATAAGG CCTGCCTACT TTGCACCAGA TAAGATAGAA
ACCGACAAGC TTTTTTCCGA TATGCAGAAA AAACATATCC ATATGGCGAT TTTGATAGAC
GAATACGGTG GATTTTCTGG GGTTGTCACA ATGGAAGATT TGATAGAAGA AATTGTAGGG
GATATAGATG ATTCCTACGA CTATGATATT CCAGAAATCA AGGAAAATGG CAGAGATGTC
TTCGTAGTCA AGGCTTCTGT AGGTATCAAG GACCTAAATG AGAAGATAAA TATAGGTATC
GATGAAGATA ACGAAAACTA CGATTCCTTG GGAGGTTTTA TTATAGACAG GCTTGGCTAT
ATACCGGAAG AAGACTCCAA GCTGTCCTTT GATTACAATG GTTACGAGAT CAAAATCCTC
TATATAGAAG ATAATAGAAT CAAGGCTGTT AGGATTAGAA AATTAAAAAA TAAAGAAGAT
AAAGAAGACT AG
|
|---|
| Protein sequence | METGPYHSLI TTLSIILLLF INGVFTAIHT GLISLNTSKL EEDSLNGDEK AGSVLKILSN
QDRLNQSFEI ANIIFSLLTI AYFAKRLREV SYDGYFWGGI LSERWVTIVA IVVYTILKLI
FVDKIPQRIG VRFPMEITKM ATGITKLIMV LTRPIVAFTT AVTNLFMNIF GIEAKNIQKQ
VTGEQIKSIV QIGEDQGILR PMESKMIHSI MAFDDLLAEE IMTARTDVFM IDINDKDKEY
LEEFVKIKHA RIPVYDGEVD NILGIVYTKD FLLEATKVGL KNVEIKEIIR PAYFAPDKIE
TDKLFSDMQK KHIHMAILID EYGGFSGVVT MEDLIEEIVG DIDDSYDYDI PEIKENGRDV
FVVKASVGIK DLNEKINIGI DEDNENYDSL GGFIIDRLGY IPEEDSKLSF DYNGYEIKIL
YIEDNRIKAV RIRKLKNKED KED
|
|---|
| |