Gene Apre_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1671 
Symbol 
ID8398483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1813622 
End bp1814722 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content38% 
IMG OID644996034 
ProductABC transporter related 
Protein accessionYP_003153412 
Protein GI257067156 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAT TAAAATTCGA CCATATTTAT AAAATATATG ATAACAAATT TACCGCAGTA 
AAAGATTTTA ACTTAGAGAT AAAGGATGAA GAATTCGTAG TATTCGTAGG ACCATCCGGC
TGCGGTAAGT CCACAACTTT AAGAATGGTA GCAGGACTTG AAGAAATATC CAAAGGCGAG
CTTTATATCG GAGATAAGCT CGTAAACAAT GTTGAACCAA AGGATAGAGA TATAGCCATG
GTATTTCAAA ACTATGCCCT CTACCCTCAA ATGACAGTCA AAGAAAATAT GAGCTATGCC
CTAAGAATTG CAAAAGTTCC AAAAGATGCA ATCGATAAGA AGGTAAAGGC TGCAGCAGAA
GTTCTAGGTC TTGAAAACTA CCTAGATAGA AAGCCTCAGG CCCTATCTGG TGGTCAAAGA
CAAAGAGTTG CCCTAGGCCG TGCCATAGTT AGAGACCCAC AAGTTTTCCT AATGGATGAG
CCCTTAAGTA ACTTGGATGC CAAATTGAGA GTCCAAACAA GAGCAGAAAT CTCAAAACTT
CACGAACAAC TAGATACAAC CTTTATCTAC GTAACTCACG ATCAGACAGA GGCTATGACT
ATGGCAGATA GGATTGTAAT CATGGAAGAT GGGATAATCA AGCAAGTTGA CAGTCCAGTC
AATGTTTACT CCAAACCTGA AAACTTGTTT GTGGCAACTT TCATAGGATC TCCACAAATG
AATCTAATTA ATGGTAAAGT AATAGTAGAA GATGATAATT ACTATATGGT AAACGATAAT
ATCAAATTCC ATATTTCAAA AACAAAGGGA GATCAAATAA AATCCAAGGG ATACTTGAAC
AAGGACTTAG TTTTGGGTAT AAGACCTGAG CATATTTACG GCGATTTTAG AAAGACCGAA
TCTTCTATAG TTGGCCTAGT CACCTTTATC GAGCTACTCG GTGCCCAACA ATATGCCTAT
CTAGACGTAG CTGGCGAGAA GATTAATGCT GTTTTGAGCA TGGATGAAAA TTTGAGCAAA
AACCAAGAAC TTAAATTATA CCTAGACGAG GAAAAAATGC ACTTTTTCGA CAAGGACTCC
CAAGAAAACA TTCTTCTATG A
 
Protein sequence
MAGLKFDHIY KIYDNKFTAV KDFNLEIKDE EFVVFVGPSG CGKSTTLRMV AGLEEISKGE 
LYIGDKLVNN VEPKDRDIAM VFQNYALYPQ MTVKENMSYA LRIAKVPKDA IDKKVKAAAE
VLGLENYLDR KPQALSGGQR QRVALGRAIV RDPQVFLMDE PLSNLDAKLR VQTRAEISKL
HEQLDTTFIY VTHDQTEAMT MADRIVIMED GIIKQVDSPV NVYSKPENLF VATFIGSPQM
NLINGKVIVE DDNYYMVNDN IKFHISKTKG DQIKSKGYLN KDLVLGIRPE HIYGDFRKTE
SSIVGLVTFI ELLGAQQYAY LDVAGEKINA VLSMDENLSK NQELKLYLDE EKMHFFDKDS
QENILL