Gene Apre_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1665 
Symbol 
ID8398477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp1807438 
End bp1807824 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content39% 
IMG OID644996029 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_003153407 
Protein GI257067151 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000418969 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG CAGTAATATT AACAGGCCAC GGGCAAATCG CCTCTGGCAT ATATTCAAGT 
GTCAAAATGA TTGCAGGAGA ATTTGAAAAT ATTAGAATAT GTGAATTTAA AGAAGGAGAA 
AACTACGAAA AGCTAGACGA AAAGTTAGAG AAAGCCTACG AGGACCTAAA AGCTTACGAC 
AATATAGTAG TCCTCGCAGA CATAGGAGGA GGAACCCCCT TTAACAGGGC TGTCTTGTCC 
CTAAGCAAAT ACGATAAGAT TAGCTTTGTC TCAGGAGTTA ACTTCGAAAT GCTCTACTAC 
GCCCTAACAA GCGAAATAGC TGATTTAGAC CTTTATATAA AAGATATAAT TGACCACGCC 
AAGGCCTCTG TATTTAGATT TGAATAG
 
Protein sequence
MKNAVILTGH GQIASGIYSS VKMIAGEFEN IRICEFKEGE NYEKLDEKLE KAYEDLKAYD 
NIVVLADIGG GTPFNRAVLS LSKYDKISFV SGVNFEMLYY ALTSEIADLD LYIKDIIDHA 
KASVFRFE