| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1644 |
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| Symbol | |
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| ID | 8398456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1785834 |
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| End bp | 1786538 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644996008 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_003153386 |
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| Protein GI | 257067130 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000329546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAGA TATATGGAAG AAAGCCGGTT CTAGACACCC TAGATACAGA CATTAAAGTC
TACAAGGCCT ATATCTTAAA GCAAAATTCC AAGCTGGTAG ATAAGATAAT AGATAAACTA
AATCAAAAAA ATATAGAAAT ATCCTTTGTA GATAAGAGAT TTTTTGATAA GATAGATATG
AACCACCAGG GCGTCATGCT TGAGGTCGAA TCTTTTAAGT ATTCTAGCTT GGAGGACTTA
TCAGATTCTT CAAGGCTTAT AATCCTAGAT AAAATCGAAG ACCCTCACAA CCTAGGCGCT
ATTATAAGGA GCGCAGAAAG CTTTGGCTTC GATGCAGTTA TAATTCCAGA AAGAAGATCA
GCTTCTGTAA CTTCTACAGT ATATAAGACC AGTGCTGGAG CAATTAATAA TATCAAGGTA
GTAAGGGTTA CCAATCTAAC TAGGACCATA AAGGACCTTA AGGATAAGGG ATTTTGGATC
TATGGTCTTG CTGGAGAAGC CCACTCTGAT ATAAGTCATG CAGACCTAAG AGGTAAGGTA
GGTCTTGTTG TAGGCAATGA GGGTGAAGGA ATCTCTAGAC TTGTTAGGGA GAATTGTGAT
ATGCTTATAA ATATACCAAT GCTTGGGAGA GTTAATAGCT TAAATGCCTC TGTAGCGGCG
GCGATTTCTA TGTATGAGCT ATTAAGACAA AATGGCTTTA ACTAA
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| Protein sequence | MDKIYGRKPV LDTLDTDIKV YKAYILKQNS KLVDKIIDKL NQKNIEISFV DKRFFDKIDM
NHQGVMLEVE SFKYSSLEDL SDSSRLIILD KIEDPHNLGA IIRSAESFGF DAVIIPERRS
ASVTSTVYKT SAGAINNIKV VRVTNLTRTI KDLKDKGFWI YGLAGEAHSD ISHADLRGKV
GLVVGNEGEG ISRLVRENCD MLINIPMLGR VNSLNASVAA AISMYELLRQ NGFN
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